RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CRHR1P34998 444 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 SPAM1P38567 509 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 CDKN1CP49918 316 aaPredicted RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 SEC13P55735 322 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 WDR4P57081 412 aaKnown RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 CACNG1Q06432 222 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 RALGDSQ12967 914 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 USP10Q14694 798 aaKnown RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 LRRC14Q15048 493 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 ZKSCAN8Q15776 578 aaPredicted RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 RBM20Q5T481 1227 aaKnown RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 PTCRAQ6ISU1 281 aaPredicted RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 TTC7BQ86TV6 843 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 SLC41A1Q8IVJ1 513 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 PIANPQ8IYJ0 282 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 PPP1R16AQ96I34 528 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 CABS1Q96KC9 395 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 MLXIPLQ9NP71 852 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 IL26Q9NPH9 171 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 CORO1CQ9ULV4 474 aaPredicted RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 FNDC3AQ9Y2H6 1198 aaKnown RBP23.81■■□□□ 1.4
SNX3-203ENST00000368979 SLC30A1Q9Y6M5 507 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 BPTFQ12830 3046 aa23.81■■□□□ 1.4
SNX3-203ENST00000368979 C1QTNF3-AMACRE9PGA6 284 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 SRP72O76094 671 aaKnown RBP23.8■■□□□ 1.4
SNX3-203ENST00000368979 ASMTLO95671 621 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 EGFP01133 1207 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 XPAP23025 273 aaPredicted RBP23.8■■□□□ 1.4
SNX3-203ENST00000368979 TIE1P35590 1138 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 MMP12P39900 470 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 WASP42768 502 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 POU4F1Q01851 419 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 GABPB1Q06547 395 aaPredicted RBP23.8■■□□□ 1.4
SNX3-203ENST00000368979 CAMK2GQ13555 558 aaPredicted RBP23.8■■□□□ 1.4
SNX3-203ENST00000368979 ARHGEF7Q14155 803 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 ZRANB3Q5FWF4 1079 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 AARS2Q5JTZ9 985 aaKnown RBP23.8■■□□□ 1.4
SNX3-203ENST00000368979 IER5LQ5T953 404 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 FAM151BQ6UXP7 276 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 GPATCH11Q8N954 259 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 KCNV2Q8TDN2 545 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 ELMO2Q96JJ3 720 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 OMDQ99983 421 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 SLC13A1Q9BZW2 595 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 SLC17A7Q9P2U7 560 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 CKAP5Q14008 2032 aa23.8■■□□□ 1.4
SNX3-203ENST00000368979 A0A096LPK6 155 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 GLYATL1P3A0A0U1RQE8 302 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 NARSO43776 548 aaKnown RBP23.79■■□□□ 1.4
SNX3-203ENST00000368979 PRAMEF1O95521 474 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 IL1BP01584 269 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 GLULP15104 373 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 DRD1P21728 446 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 PMLP29590 882 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 CCT5P48643 541 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 PFKPQ01813 784 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 PPM1JQ5JR12 505 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 RNF187Q5TA31 235 aaPredicted RBP23.79■■□□□ 1.4
SNX3-203ENST00000368979 ZDHHC20Q5W0Z9 365 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 MMAAQ8IVH4 418 aaKnown RBP23.79■■□□□ 1.4
SNX3-203ENST00000368979 GPR26Q8NDV2 337 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 LPGAT1Q92604 370 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 MSANTD3Q96H12 275 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 NDNQ99608 321 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 FAM96AQ9H5X1 160 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 PLLPQ9Y342 182 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 SPINT1O43278 529 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 GLRA3O75311 464 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 C2P06681 752 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 LSP1P33241 339 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 ETV4P43268 484 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 SPINT3P49223 89 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 TTPAP49638 278 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 RAB10P61026 200 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 ERAP2Q6P179 960 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 SNX20Q7Z614 316 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 CLEC14AQ86T13 490 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 PLEKHG4BQ96PX9 1271 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 GABRG3Q99928 467 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 IQCGQ9H095 443 aaKnown RBP23.79■■□□□ 1.4
SNX3-203ENST00000368979 VPS11Q9H270 941 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 C12orf65Q9H3J6 166 aaKnown RBP23.79■■□□□ 1.4
SNX3-203ENST00000368979 CCDC134Q9H6E4 229 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 SLC2A4RGQ9NR83 387 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 PKD2L2Q9NZM6 624 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 VPS9D1Q9Y2B5 631 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 CRYL1Q9Y2S2 319 aa23.79■■□□□ 1.4
SNX3-203ENST00000368979 TRBV5-4A0A0C4DH59 114 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 GPR39O43194 453 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 TOP3BO95985 862 aaKnown RBP23.78■■□□□ 1.4
SNX3-203ENST00000368979 IL9P15248 144 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 STMN1P16949 149 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 ITGALP20701 1170 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 SUOXP51687 545 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 TAS2R39P59534 338 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 GRSF1Q12849 480 aaKnown RBP eCLIP23.78■■□□□ 1.4
SNX3-203ENST00000368979 NFATC2Q13469 925 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 INSCQ1MX18 579 aa23.78■■□□□ 1.4
SNX3-203ENST00000368979 PUS10Q3MIT2 529 aaKnown RBP23.78■■□□□ 1.4
SNX3-203ENST00000368979 HECTD2Q5U5R9 776 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms