RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 FUT11Q495W5 492 aa8.82□□□□□ -1
SNX27-201ENST00000368838 PREPLQ4J6C6 727 aaPredicted RBP8.82□□□□□ -1
SNX27-201ENST00000368838 SLC36A4Q6YBV0 504 aa8.82□□□□□ -1
SNX27-201ENST00000368838 KIAA0408Q6ZU52 694 aa8.82□□□□□ -1
SNX27-201ENST00000368838 FAM124AQ86V42 546 aa8.82□□□□□ -1
SNX27-201ENST00000368838 IGDCC3Q8IVU1 814 aa8.82□□□□□ -1
SNX27-201ENST00000368838 RAVER1Q8IY67 606 aaKnown RBP8.82□□□□□ -1
SNX27-201ENST00000368838 PGBD5Q8N414 524 aa8.82□□□□□ -1
SNX27-201ENST00000368838 HDDC3Q8N4P3 179 aa8.82□□□□□ -1
SNX27-201ENST00000368838 ZNF366Q8N895 744 aa8.82□□□□□ -1
SNX27-201ENST00000368838 FAM76AQ8TAV0 307 aa8.82□□□□□ -1
SNX27-201ENST00000368838 HCAR2Q8TDS4 363 aa8.82□□□□□ -1
SNX27-201ENST00000368838 WFIKKN2Q8TEU8 576 aa8.82□□□□□ -1
SNX27-201ENST00000368838 MZB1Q8WU39 189 aa8.82□□□□□ -1
SNX27-201ENST00000368838 CDKL2Q92772 493 aa8.82□□□□□ -1
SNX27-201ENST00000368838 FOXJ1Q92949 421 aa8.82□□□□□ -1
SNX27-201ENST00000368838 WNT2BQ93097 391 aa8.82□□□□□ -1
SNX27-201ENST00000368838 ISL2Q96A47 359 aa8.82□□□□□ -1
SNX27-201ENST00000368838 GABRG3Q99928 467 aa8.82□□□□□ -1
SNX27-201ENST00000368838 TBL1YQ9BQ87 522 aa8.82□□□□□ -1
SNX27-201ENST00000368838 MCMBPQ9BTE3 642 aa8.82□□□□□ -1
SNX27-201ENST00000368838 GPR174Q9BXC1 333 aa8.82□□□□□ -1
SNX27-201ENST00000368838 MKRN2Q9H000 416 aaKnown RBP8.82□□□□□ -1
SNX27-201ENST00000368838 MIR1-1HGQ9H1L0 117 aa8.82□□□□□ -1
SNX27-201ENST00000368838 CAPN10Q9HC96 672 aa8.82□□□□□ -1
SNX27-201ENST00000368838 TREX1Q9NSU2 369 aa8.82□□□□□ -1
SNX27-201ENST00000368838 HACD3Q9P035 362 aa8.82□□□□□ -1
SNX27-201ENST00000368838 SEPT10Q9P0V9 454 aa8.82□□□□□ -1
SNX27-201ENST00000368838 PSMC3IPQ9P2W1 217 aaPredicted RBP8.82□□□□□ -1
SNX27-201ENST00000368838 KLK13Q9UKR3 277 aa8.82□□□□□ -1
SNX27-201ENST00000368838 TTLL3Q9Y4R7 772 aa8.82□□□□□ -1
SNX27-201ENST00000368838 DSPP15924 2871 aaKnown RBP8.82□□□□□ -1
SNX27-201ENST00000368838 ANKRD11Q6UB99 2663 aaPredicted RBP8.82□□□□□ -1
SNX27-201ENST00000368838 IQANK1A0A1B0GTG1 560 aa8.81□□□□□ -1
SNX27-201ENST00000368838 HEATR9A2RTY3 570 aa8.81□□□□□ -1
SNX27-201ENST00000368838 MROH6A6NGR9 719 aa8.81□□□□□ -1
SNX27-201ENST00000368838 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
SNX27-201ENST00000368838 MEI4A8MW99 385 aa8.81□□□□□ -1
SNX27-201ENST00000368838 GOLGA8MH3BSY2 632 aa8.81□□□□□ -1
SNX27-201ENST00000368838 INSIG1O15503 277 aa8.81□□□□□ -1
SNX27-201ENST00000368838 FZD6O60353 706 aa8.81□□□□□ -1
SNX27-201ENST00000368838 AVILO75366 819 aa8.81□□□□□ -1
SNX27-201ENST00000368838 NEBLO76041 1014 aa8.81□□□□□ -1
SNX27-201ENST00000368838 NDST3O95803 873 aa8.81□□□□□ -1
SNX27-201ENST00000368838 ASLP04424 464 aa8.81□□□□□ -1
SNX27-201ENST00000368838 ATXN1LP0C7T5 689 aaKnown RBP8.81□□□□□ -1
SNX27-201ENST00000368838 CA4P22748 312 aa8.81□□□□□ -1
SNX27-201ENST00000368838 SERPINH1P50454 418 aaKnown RBP8.81□□□□□ -1
SNX27-201ENST00000368838 SGSHP51688 502 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CDK18Q07002 472 aa8.81□□□□□ -1
SNX27-201ENST00000368838 MGAT5Q09328 741 aa8.81□□□□□ -1
SNX27-201ENST00000368838 NIPAL4Q0D2K0 466 aa8.81□□□□□ -1
SNX27-201ENST00000368838 ZNF235Q14590 738 aa8.81□□□□□ -1
SNX27-201ENST00000368838 STARD3Q14849 445 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CRYMQ14894 314 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CYTH1Q15438 398 aa8.81□□□□□ -1
SNX27-201ENST00000368838 FAXCQ5TGI0 409 aa8.81□□□□□ -1
SNX27-201ENST00000368838 PEAR1Q5VY43 1037 aaPredicted RBP8.81□□□□□ -1
SNX27-201ENST00000368838 RNF219Q5W0B1 726 aaPredicted RBP8.81□□□□□ -1
SNX27-201ENST00000368838 KIAA0930Q6ICG6 404 aaPredicted RBP8.81□□□□□ -1
SNX27-201ENST00000368838 SH2D5Q6ZV89 423 aa8.81□□□□□ -1
SNX27-201ENST00000368838 B4GALNT4Q76KP1 1039 aa8.81□□□□□ -1
SNX27-201ENST00000368838 TRABD2AQ86V40 505 aa8.81□□□□□ -1
SNX27-201ENST00000368838 EXOC3L1Q86VI1 746 aa8.81□□□□□ -1
SNX27-201ENST00000368838 LCA5Q86VQ0 697 aa8.81□□□□□ -1
SNX27-201ENST00000368838 MFN1Q8IWA4 741 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CFAP52Q8N1V2 620 aa8.81□□□□□ -1
SNX27-201ENST00000368838 PNPLA1Q8N8W4 532 aa8.81□□□□□ -1
SNX27-201ENST00000368838 OR7D4Q8NG98 312 aa8.81□□□□□ -1
SNX27-201ENST00000368838 OR52K1Q8NGK4 314 aa8.81□□□□□ -1
SNX27-201ENST00000368838 OR2W6PQ8NHA6 318 aa8.81□□□□□ -1
SNX27-201ENST00000368838 GABPB2Q8TAK5 448 aaPredicted RBP8.81□□□□□ -1
SNX27-201ENST00000368838 DTX3LQ8TDB6 740 aa8.81□□□□□ -1
SNX27-201ENST00000368838 ACMSDQ8TDX5 336 aa8.81□□□□□ -1
SNX27-201ENST00000368838 FBF1Q8TES7 1133 aa8.81□□□□□ -1
SNX27-201ENST00000368838 DDI1Q8WTU0 396 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CYB5D2Q8WUJ1 264 aa8.81□□□□□ -1
SNX27-201ENST00000368838 DCAKDQ8WVC6 231 aa8.81□□□□□ -1
SNX27-201ENST00000368838 TOE1Q96GM8 510 aaKnown RBP8.81□□□□□ -1
SNX27-201ENST00000368838 LRIG1Q96JA1 1093 aa8.81□□□□□ -1
SNX27-201ENST00000368838 TUBGCP5Q96RT8 1024 aa8.81□□□□□ -1
SNX27-201ENST00000368838 LYSMD1Q96S90 227 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CPEB1Q9BZB8 566 aaKnown RBP8.81□□□□□ -1
SNX27-201ENST00000368838 CIPCQ9C0C6 399 aa8.81□□□□□ -1
SNX27-201ENST00000368838 TRABDQ9H4I3 376 aa8.81□□□□□ -1
SNX27-201ENST00000368838 SLC32A1Q9H598 525 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CCDC134Q9H6E4 229 aa8.81□□□□□ -1
SNX27-201ENST00000368838 VPS37BQ9H9H4 285 aa8.81□□□□□ -1
SNX27-201ENST00000368838 SAMD15Q9P1V8 674 aa8.81□□□□□ -1
SNX27-201ENST00000368838 ADAM21Q9UKJ8 722 aa8.81□□□□□ -1
SNX27-201ENST00000368838 CHMP2BQ9UQN3 213 aa8.81□□□□□ -1
SNX27-201ENST00000368838 PPIL1Q9Y3C6 166 aa8.81□□□□□ -1
SNX27-201ENST00000368838 SHROOM3Q8TF72 1996 aa8.81□□□□□ -1
SNX27-201ENST00000368838 DMXL2Q8TDJ6 3036 aa8.81□□□□□ -1
SNX27-201ENST00000368838 PRPF4O43172 522 aaKnown RBP eCLIP8.8□□□□□ -1
SNX27-201ENST00000368838 SLC7A4O43246 635 aa8.8□□□□□ -1
SNX27-201ENST00000368838 HTRA2O43464 458 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 TIMM44O43615 452 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SH3BP5O60239 455 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ZNF217O75362 1048 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms