RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 GABPB2Q8TAK5 448 aaPredicted RBP20.6■□□□□ 0.89
SHISA4-201ENST00000362011 GANCQ8TET4 914 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 EID2BQ96D98 161 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 CDKN2AIPNLQ96HQ2 116 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 TBATAQ96M53 351 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 BPIFA1Q9NP55 256 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 PKD2L2Q9NZM6 624 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 IL1RAPL1Q9NZN1 696 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 ITM2BQ9Y287 266 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 EML5Q05BV3 1969 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 NUMA1Q14980 2115 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 POC1B-GALNT4F8VUJ3 575 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 H7C0S8 307 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 AREL1O15033 823 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 SPINT1O43278 529 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 AP1G1O43747 822 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 C1QAP02745 245 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 C1SP09871 688 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 ERVK-10P10266 1014 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 ACADMP11310 421 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 NDUFV2P19404 249 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 ARNTP27540 789 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 ARCN1P48444 511 aaKnown RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 PTSQ03393 145 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 THOC5Q13769 683 aaKnown RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 SMAD1Q15797 465 aaKnown RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 TMEM52BQ4KMG9 183 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 AGBL4Q5VU57 503 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 AFTPHQ6ULP2 937 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 KIAA1324Q6UXG2 1013 aaKnown RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 MARK2Q7KZI7 788 aaKnown RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 CTAGE3PQ8IX95 158 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 PPM1NQ8N819 430 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 OR6P1Q8NGX9 317 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 MRGPRX1Q96LB2 322 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 FAM167BQ9BTA0 163 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 ROPN1BQ9BZX4 212 aaPredicted RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 CHRDQ9H2X0 955 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 PPCSQ9HAB8 311 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 ROPN1Q9HAT0 212 aaPredicted RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 SMYD2Q9NRG4 433 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 FBXL12Q9NXK8 326 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 NCDNQ9UBB6 729 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 FETUBQ9UGM5 382 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 FKBPLQ9UIM3 349 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 SMG5Q9UPR3 1016 aaKnown RBP20.59■□□□□ 0.89
SHISA4-201ENST00000362011 FADS3Q9Y5Q0 445 aa20.59■□□□□ 0.89
SHISA4-201ENST00000362011 CCDC162PA2VCL2 907 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 PSMD11O00231 422 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 CCL22O00626 93 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 NEMP1O14524 444 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 RNASEH2AO75792 299 aaKnown RBP20.58■□□□□ 0.89
SHISA4-201ENST00000362011 ELFN1P0C7U0 828 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 GABRG2P18507 467 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 MTAPQ13126 283 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 GAS6Q14393 721 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 HSP90AA5PQ58FG0 334 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 LIPIQ6XZB0 460 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 CROCCP2Q86T23 111 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 KBTBD6Q86V97 674 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 CBARPQ8N350 705 aaPredicted RBP20.58■□□□□ 0.89
SHISA4-201ENST00000362011 CALML6Q8TD86 181 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 TMEM109Q9BVC6 243 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 RAD18Q9NS91 495 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 IARS2Q9NSE4 1012 aaKnown RBP20.58■□□□□ 0.89
SHISA4-201ENST00000362011 ZFATQ9P243 1243 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 VPS18Q9P253 973 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 GGT7Q9UJ14 662 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 NCKAP1Q9Y2A7 1128 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 PIKFYVEQ9Y2I7 2098 aa20.58■□□□□ 0.89
SHISA4-201ENST00000362011 CXorf49A8MYA2 514 aaPredicted RBP20.57■□□□□ 0.88
SHISA4-201ENST00000362011 TCEA3O75764 348 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 GOT2P00505 430 aaKnown RBP20.57■□□□□ 0.88
SHISA4-201ENST00000362011 SPAM1P38567 509 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 ZNF844Q08AG5 666 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 CEP85LQ5SZL2 805 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 TEDDM1Q5T9Z0 273 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 ZDHHC20Q5W0Z9 365 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 TSSK4Q6SA08 328 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 USP30Q70CQ3 517 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 PTAR1Q7Z6K3 402 aaPredicted RBP20.57■□□□□ 0.88
SHISA4-201ENST00000362011 LRRC6Q86X45 466 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 LMNTD2Q8IXW0 634 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 EPS8L3Q8TE67 593 aaKnown RBP20.57■□□□□ 0.88
SHISA4-201ENST00000362011 CXorf40AQ8TE69 158 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 FAM131CQ96AQ9 280 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 PAFAH2Q99487 392 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 IER2Q9BTL4 223 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 WRAP53Q9BUR4 548 aaKnown RBP20.57■□□□□ 0.88
SHISA4-201ENST00000362011 SUDS3Q9H7L9 328 aaPredicted RBP20.57■□□□□ 0.88
SHISA4-201ENST00000362011 NSMCE4AQ9NXX6 385 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 SERGEFQ9UGK8 458 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 SLC24A2Q9UI40 661 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 FZD4Q9ULV1 537 aa20.57■□□□□ 0.88
SHISA4-201ENST00000362011 SMIM23A6NLE4 172 aa20.56■□□□□ 0.88
SHISA4-201ENST00000362011 PRR5-ARHGAP8B1AHC4 643 aa20.56■□□□□ 0.88
SHISA4-201ENST00000362011 GOLGA8KD6RF30 607 aa20.56■□□□□ 0.88
SHISA4-201ENST00000362011 GOLGA8TH3BQL2 631 aa20.56■□□□□ 0.88
SHISA4-201ENST00000362011 RASGRF2O14827 1237 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms