RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ZNF646O15015 1829 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 A8MT66 165 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANGPT2O15123 496 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 IPO13O94829 963 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 NCK1P16333 377 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 HOXA11P31270 313 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 NKX2-5P52952 324 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SOX4Q06945 474 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 SQLEQ14534 574 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 GRIK4Q16099 956 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 PGS1Q32NB8 556 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TJAP1Q5JTD0 557 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 PCID2Q5JVF3 399 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 KCTD11Q693B1 232 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 CLEC20AQ6ZU45 233 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TMEM26Q6ZUK4 368 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 GPRIN1Q7Z2K8 1008 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 APOBEC3FQ8IUX4 373 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ATPAF2Q8N5M1 289 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 NAT16Q8N8M0 369 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TANKQ92844 425 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TBL1YQ9BQ87 522 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ADI1Q9BV57 179 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 COLEC11Q9BWP8 271 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 NFKBIZQ9BYH8 718 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 NAA50Q9GZZ1 169 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 EML4Q9HC35 981 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TRHDEQ9UKU6 1024 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 UBQLN1Q9UMX0 589 aaKnown RBP8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 TRAF6Q9Y4K3 522 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 ST14Q9Y5Y6 855 aa8.24□□□□□ -1.09
CDC42SE1-201ENST00000357235 A0A0J9YYE9 177 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 DHRS12A0PJE2 317 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ERI2A8K979 691 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 NFKBIEO00221 500 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 TAF4O00268 1085 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 PPP6CO00743 305 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 DYNC1LI2O43237 492 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 TSPAN9O75954 239 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 BCL10O95999 233 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 IL10P22301 178 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ENPP1P22413 925 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 CXCR2P25025 360 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 PSMA4P25789 261 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 HADHAP40939 763 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 NR4A2P43354 598 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 PLIN5Q00G26 463 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 CHRNEQ04844 493 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 RFTN1Q14699 578 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 CYP51A1Q16850 503 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZIK1Q3SY52 487 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 PAN2Q504Q3 1202 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 C6orf10Q5SRN2 563 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 DCP2Q8IU60 420 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 REM2Q8IYK8 340 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 CRYBG2Q8N1P7 616 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 LRRC52Q8N7C0 313 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 OR2T34Q8NGX1 318 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 OR2T3Q8NH03 318 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 GIPC2Q8TF65 315 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ACDQ96AP0 544 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZFP42Q96MM3 310 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 TCF12Q99081 682 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 DOK1Q99704 481 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 GDAP2Q9NXN4 497 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 NSMCE4AQ9NXX6 385 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 BTRCQ9Y297 605 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 FER1L6Q2WGJ9 1857 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 TTC24A2A3L6 582 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 M0QX08 132 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 EI24O14681 340 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 SLC22A2O15244 555 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 NCAM2O15394 837 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 MSI1O43347 362 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 USP2O75604 605 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 SIX3O95343 332 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 RPS12P25398 132 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 DCKP27707 260 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 OXTRP30559 389 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ETV3P41162 512 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 GNG2P59768 71 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 MAXP61244 160 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 YBX1P67809 324 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 PHC1P78364 1004 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 CEP78Q5JTW2 689 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 GPR158Q5T848 1215 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 AGAP9Q5VTM2 703 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 NOTUMQ6P988 496 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 LINC00523Q86TU6 105 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 AKAP14Q86UN6 197 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 PIM3Q86V86 326 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 LSMEM1Q8N8F7 131 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ATL1Q8WXF7 558 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 TUBGCP3Q96CW5 907 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 C3orf30Q96M34 536 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF560Q96MR9 790 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 GPR78Q96P69 363 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 MTG1Q9BT17 334 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 HOXD1Q9GZZ0 328 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms