RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 GSTA1P08263 222 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 SLC35E2BP0CK96 405 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 BPIP17213 487 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 DRD4P21917 467 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 KCNA5P22460 613 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 LHCGRP22888 699 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 XPAP23025 273 aaPredicted RBP20.48■□□□□ 0.87
TRIM4-202ENST00000354241 CACNG1Q06432 222 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 ZKSCAN8Q15776 578 aaPredicted RBP20.48■□□□□ 0.87
TRIM4-202ENST00000354241 C9orf64Q5T6V5 341 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 NUDT18Q6ZVK8 323 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 PIANPQ8IYJ0 282 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF473Q8WTR7 871 aaKnown RBP20.48■□□□□ 0.87
TRIM4-202ENST00000354241 OR8D1Q8WZ84 308 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 PBXIP1Q96AQ6 731 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 TSPAN17Q96FV3 270 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 LRCH3Q96II8 777 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 TSNARE1Q96NA8 513 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 TCF12Q99081 682 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 TMEM245Q9H330 911 aa20.48■□□□□ 0.87
TRIM4-202ENST00000354241 TSPAN11A1L157 253 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 UPK3BL1B0FP48 263 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 UPK3BL2E5RIL1 263 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 KPNA3O00505 521 aaPredicted RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 CYP2A6P11509 494 aaPredicted RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 IL12RB1P42701 662 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 EGFLAMQ63HQ2 1017 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 FAM45BPQ6NSW5 357 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 CLEC14AQ86T13 490 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 FAM45AQ8TCE6 357 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 MECRQ9BV79 373 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 FBRSL1Q9HCM7 1045 aaKnown RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 THAP10Q9P2Z0 257 aaPredicted RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 CORO1CQ9ULV4 474 aaPredicted RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 ACOT9Q9Y305 439 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 VWA7Q9Y334 891 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 GOLGA8CPA6NN73 597 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 C16orf96A6NNT2 1141 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 C2CD4DB7Z1M9 353 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 PFDN6O15212 129 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 GPR39O43194 453 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 PLIN3O60664 434 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 SRP72O76094 671 aaKnown RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 PRAMEF1O95521 474 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 PRNPP04156 253 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 CHRM1P11229 460 aaPredicted RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 TIMP2P16035 220 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 SPAM1P38567 509 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 TTPAP49638 278 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 ILF2Q12905 390 aaKnown RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 ARHGEF7Q14155 803 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 AARS2Q5JTZ9 985 aaKnown RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF549Q6P9A3 640 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF771Q7L3S4 317 aaPredicted RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 TTC7BQ86TV6 843 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 SCG3Q8WXD2 468 aaKnown RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 ZNF75CPQ92670 426 aaPredicted RBP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRIM4-202ENST00000354241 C19orf43Q9BQ61 176 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 CACNA2D2Q9NY47 1150 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 DKK3Q9UBP4 350 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 APPL1Q9UKG1 709 aa20.47■□□□□ 0.87
TRIM4-202ENST00000354241 XIRP2A4UGR9 3374 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 DNAJC6O75061 913 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 NFKBIAP25963 317 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 FMO4P31512 558 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 VIPR1P32241 457 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 GALK1P51570 392 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 CDKN2DP55273 166 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 PTSQ03393 145 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 SKIV2LQ15477 1246 aaKnown RBP20.46■□□□□ 0.87
TRIM4-202ENST00000354241 KCTD4Q8WVF5 259 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 LPGAT1Q92604 370 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 ERLEC1Q96DZ1 483 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 ACOX2Q99424 681 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 NSRP1Q9H0G5 558 aaKnown RBP20.46■□□□□ 0.87
TRIM4-202ENST00000354241 PCDH12Q9NPG4 1184 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 IL26Q9NPH9 171 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 FGFR1OP2Q9NVK5 253 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 SARDHQ9UL12 918 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 HCN2Q9UL51 889 aa20.46■□□□□ 0.87
TRIM4-202ENST00000354241 A0A087X1B8 175 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 GLYATL1P3A0A0U1RQE8 302 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 GAPDHSO14556 408 aaPredicted RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 PROCP04070 461 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 EPHX1P07099 455 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 C1SP09871 688 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 ELAVL3Q14576 367 aaKnown RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 CCDC153Q494R4 210 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 RNF187Q5TA31 235 aaPredicted RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 FAM47EQ6ZV65 393 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 PARS2Q7L3T8 475 aaKnown RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 PIP4K2CQ8TBX8 421 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 HCAR2Q8TDS4 363 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 P2RY13Q9BPV8 354 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 AARSD1Q9BTE6 412 aaKnown RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 C1QTNF1Q9BXJ1 281 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 CCDC68Q9H2F9 335 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 ASB8Q9H765 288 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 UBE2ZQ9H832 354 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms