RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ZNF839A8K0R7 811 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 M0QZ92 97 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 PSMD12O00232 456 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 FGF10O15520 208 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 AHCYL1O43865 530 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TSPAN12O95859 305 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 IGLV3-27P01718 113 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 COL6A2P12110 1019 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 NAT1P18440 290 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 FMO4P31512 558 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 CHN2P52757 468 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ZNF33AQ06730 810 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 FAM83EQ2M2I3 478 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 C4orf46Q504U0 113 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 RABL3Q5HYI8 236 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 C6orf163Q5TEZ5 329 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SLC30A9Q6PML9 568 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MARVELD2Q8N4S9 558 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 PTGR2Q8N8N7 351 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 CEP70Q8NHQ1 597 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 PDCD6IPQ8WUM4 868 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 POM121Q96HA1 1249 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TMEM74Q96NL1 305 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 PRPF18Q99633 342 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 VN1R3Q9BXE9 311 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ZYG11BQ9C0D3 744 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SEMA4BQ9NPR2 832 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 RGS18Q9NS28 235 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 RRN3Q9NYV6 651 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 IL37Q9NZH6 218 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 UTS2RQ9UKP6 389 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SARDHQ9UL12 918 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MYOFQ9NZM1 2061 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SLC12A8A0AV02 714 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 DRGXA6NNA5 263 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 UBDO15205 165 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 CD3EAPO15446 510 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 FOXD2O60548 495 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 NBNO60934 754 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TRPA1O75762 1119 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 F11P03951 625 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ZNF37AP17032 561 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 OR1E1P30953 314 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 HADHAP40939 763 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SLC7A2P52569 658 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 HK2P52789 917 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TNK2Q07912 1038 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ART3Q13508 389 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MRPL58Q14197 206 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TRIM25Q14258 630 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ACAP2Q15057 778 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TSNQ15631 228 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SLC44A4Q53GD3 710 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 FAM171A1Q5VUB5 890 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TBPL2Q6SJ96 375 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 RBM44Q6ZP01 1051 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MON1AQ86VX9 555 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 METTL23Q86XA0 190 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SPPL2CQ8IUH8 684 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 HERC6Q8IVU3 1022 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TTC16Q8NEE8 873 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 GPATCH1Q9BRR8 931 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MFSD1Q9H3U5 465 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 EFCAB1Q9HAE3 211 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MBD1Q9UIS9 605 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 PCDHB8Q9UN66 801 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MAGED1Q9Y5V3 778 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 A0A087X1B8 175 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 FAM92AA1XBS5 289 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 NIPSNAP2O75323 286 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 B3GALT4O96024 378 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 PABPC4LP0CB38 370 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 GKP32189 559 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ACVR1Q04771 509 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SELPLGQ14242 412 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SKIV2LQ15477 1246 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 C11orf91Q3C1V1 193 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 CTSL3PQ5NE16 218 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ARMC3Q5W041 872 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MSANTD2Q6P1R3 559 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 C16orf59Q7L2K0 433 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 BEND5Q7L4P6 421 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 CHERPQ8IWX8 916 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SIDT2Q8NBJ9 832 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 OR52B6Q8NGF0 335 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 WFDC5Q8TCV5 224 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 C19orf60Q96EN9 201 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 RPRD1AQ96P16 312 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 SLC22A12Q96S37 553 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 MID1IP1Q9NPA3 183 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 OLAHQ9NV23 265 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 POLG2Q9UHN1 485 aa6.03□□□□□ -1.44
CLCN3-201ENST00000347613 CNOT6Q9ULM6 557 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 PRPF19Q9UMS4 504 aaKnown RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 ZFP37Q9Y6Q3 630 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-201ENST00000347613 TCRBV3S1A0A5B6 114 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 HEATR9A2RTY3 570 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 MTMR11A4FU01 709 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 H0Y858 1186 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 AXIN1O15169 862 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms