RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 A0A0U1RQS6 177 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 TMEM221A6NGB7 291 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 M0R296 226 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 PCDH8O95206 1070 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 GOT2P00505 430 aaKnown RBP16.3■□□□□ 0.2
SNED1-202ENST00000342631 ERVK-10P10266 1014 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 C6P13671 934 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 RPS21P63220 83 aaKnown RBP16.3■□□□□ 0.2
SNED1-202ENST00000342631 XIAPP98170 497 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 SEMG2Q02383 582 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 ACOX1Q15067 660 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 RASA2Q15283 850 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 MAP7D1Q3KQU3 841 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 GPR33Q49SQ1 333 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 AARS2Q5JTZ9 985 aaKnown RBP16.3■□□□□ 0.2
SNED1-202ENST00000342631 TEDDM1Q5T9Z0 273 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 MARK2Q7KZI7 788 aaKnown RBP16.3■□□□□ 0.2
SNED1-202ENST00000342631 HSD11B1LQ7Z5J1 315 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 UHMK1Q8TAS1 419 aaKnown RBP16.3■□□□□ 0.2
SNED1-202ENST00000342631 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.3■□□□□ 0.24e-6■■■■■ 48.1
SNED1-202ENST00000342631 ZIM3Q96PE6 472 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 HHIPQ96QV1 700 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 WRAP53Q9BUR4 548 aaKnown RBP16.3■□□□□ 0.2
SNED1-202ENST00000342631 FAM83DQ9H4H8 585 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 IL26Q9NPH9 171 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 GGT7Q9UJ14 662 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 IKBKGQ9Y6K9 419 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 TRIOO75962 3097 aa16.3■□□□□ 0.2
SNED1-202ENST00000342631 GLYATL1P3A0A0U1RQE8 302 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 LRRC72A6NJI9 287 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 PFDN6O15212 129 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 LZTS3O60299 673 aaPredicted RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 TM7SF2O76062 418 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 SHBGP04278 402 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 OGNP20774 298 aaKnown RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 HOXA6P31267 233 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 MC4RP32245 332 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 PPARGP37231 505 aaPredicted RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 CACNG1Q06432 222 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 PEX6Q13608 980 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 ITGA9Q13797 1035 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 FASTKD1Q53R41 847 aaKnown RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 SDCCAG8Q86SQ7 713 aaPredicted RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 TDRPQ86YL5 185 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 CTAGE3PQ8IX95 158 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 UNC5BQ8IZJ1 945 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 GPR26Q8NDV2 337 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 ASB12Q8WXK4 309 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 DTD2Q96FN9 168 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 TCF12Q99081 682 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 CPNE1Q99829 537 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 CATSPERZQ9NTU4 200 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 ZNF446Q9NWS9 450 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 C2orf42Q9NWW7 574 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 VPS9D1Q9Y2B5 631 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 TECTAO75443 2155 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 CD3EAPO15446 510 aaKnown RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 MMP20O60882 483 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 SRP72O76094 671 aaKnown RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 PYGLP06737 847 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 ITGALP20701 1170 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 MSH2P43246 934 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 DPTQ07507 201 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 LYPLAL1Q5VWZ2 237 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 CERS6Q6ZMG9 384 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 Q6ZVL8 140 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 SNX20Q7Z614 316 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 PTAR1Q7Z6K3 402 aaPredicted RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 RIBC1Q8N443 379 aaPredicted RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 OR2T34Q8NGX1 318 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 SLC44A1Q8WWI5 657 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 TTC1Q99614 292 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 ZSCAN5AQ9BUG6 496 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 SUDS3Q9H7L9 328 aaPredicted RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 IARS2Q9NSE4 1012 aaKnown RBP16.29■□□□□ 0.2
SNED1-202ENST00000342631 TXNDC16Q9P2K2 825 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 ZNF180Q9UJW8 692 aa16.29■□□□□ 0.2
SNED1-202ENST00000342631 PLXNA2O75051 1894 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 LRRK1Q38SD2 2015 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 RASGRF2O14827 1237 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 CDH16O75309 829 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 RECQL5O94762 991 aaPredicted RBP16.28■□□□□ 0.2
SNED1-202ENST00000342631 PRAMEF1O95521 474 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 PDGFBP01127 241 aaPredicted RBP16.28■□□□□ 0.2
SNED1-202ENST00000342631 FOXN2P32314 431 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 ETV3P41162 512 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 ZNF284Q2VY69 593 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 TRIM69Q86WT6 500 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 HORMAD1Q86X24 394 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 CILP2Q8IUL8 1156 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 TRAM1L1Q8N609 369 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 PPM1NQ8N819 430 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 C2CD4AQ8NCU7 369 aaPredicted RBP16.28■□□□□ 0.2
SNED1-202ENST00000342631 PAFAH2Q99487 392 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 DHRS4Q9BTZ2 278 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 C1QTNF7Q9BXJ2 289 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 SMYD2Q9NRG4 433 aa16.28■□□□□ 0.2
SNED1-202ENST00000342631 TBC1D3DA0A087WVF3 549 aa16.27■□□□□ 0.2
SNED1-202ENST00000342631 TBC1D3IA0A087WXS9 549 aa16.27■□□□□ 0.2
SNED1-202ENST00000342631 TBC1D3EA0A087X179 549 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms