RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 HOXB8P17481 243 aaPredicted RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 FMO4P31512 558 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SSTR3P32745 418 aaPredicted RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 RIDAP52758 137 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 CDKL1Q00532 357 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 CHAF1BQ13112 559 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 TSC22D1Q15714 1073 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 UGCGQ16739 394 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 KNOP1Q1ED39 458 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 TUSC1Q2TAM9 212 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 FBXO48Q5FWF7 155 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 MPP7Q5T2T1 576 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SLFN12LQ6IEE8 588 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 LIPIQ6XZB0 460 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 KYAT3Q6YP21 454 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 DSELQ8IZU8 1212 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SNX31Q8N9S9 440 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 CELF4Q9BZC1 486 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 OSBPL8Q9BZF1 889 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 WDR12Q9GZL7 423 aaKnown RBP16.94■□□□□ 0.3
CDK11B-201ENST00000340677 SLC6A15Q9H2J7 730 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 ST6GALNAC4Q9H4F1 302 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 PCDHB16Q9NRJ7 776 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 RNF11Q9Y3C5 154 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 PTCH2Q9Y6C5 1203 aa16.94■□□□□ 0.3
CDK11B-201ENST00000340677 PLD2O14939 933 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 EIF1BO60739 113 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 STBD1O95210 358 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 PDGFRAP16234 1089 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 SLC9A1P19634 815 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 G0S2P27469 103 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 EIF1P41567 113 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 HUNKP57058 714 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 TNFAIP2Q03169 654 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 MORF4L2Q15014 288 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 IL31Q6EBC2 164 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 CASC4Q6P4E1 433 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 CLEC4FQ8N1N0 589 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 OXR1Q8N573 874 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 RBM15BQ8NDT2 890 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 UFD1Q92890 307 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 E2F7Q96AV8 911 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 LSM14BQ9BX40 385 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 NPHS2Q9NP85 383 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 NRBP2Q9NSY0 501 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 HEY2Q9UBP5 337 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 ISPDA4D126 451 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 ZNF487B1APH4 448 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 FPGTO14772 594 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 NOL3O60936 208 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 TMEM127O75204 238 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 HTR3BO95264 441 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 BCL10O95999 233 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 ADH1CP00326 375 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 CAPNS1P04632 268 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 KCNA5P22460 613 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 RECQLP46063 649 aaPredicted RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 GSTM5P46439 218 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 DGKQP52824 942 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 WDR4P57081 412 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 C1QBPQ07021 282 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 BTN1A1Q13410 526 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 NAB2Q15742 525 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 TDRD12Q587J7 1177 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 RABGAP1LQ5R372 815 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 TRIM72Q6ZMU5 477 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 GPRIN3Q6ZVF9 776 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 AMIGO1Q86WK6 493 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 GPR156Q8NFN8 814 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 FUBP1Q96AE4 644 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 TTYH2Q9BSA4 534 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 STRA6Q9BX79 667 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 FAM126AQ9BYI3 521 aaPredicted RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 NMUR1Q9HB89 426 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 CRTAC1Q9NQ79 661 aa16.93■□□□□ 0.3
CDK11B-201ENST00000340677 GMPR2Q9P2T1 348 aaKnown RBP16.93■□□□□ 0.3
CDK11B-201ENST00000340677 ADGRA2Q96PE1 1338 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 CALUO43852 315 aaPredicted RBP16.92■□□□□ 0.3
CDK11B-201ENST00000340677 ALBP02768 609 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 CD63P08962 238 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 UBA1P22314 1058 aaKnown RBP16.92■□□□□ 0.3
CDK11B-201ENST00000340677 PSMA2P25787 234 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 EIF3EP60228 445 aaKnown RBP16.92■□□□□ 0.3
CDK11B-201ENST00000340677 SP2Q02086 613 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 CALCOCO2Q13137 446 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 CCNIQ14094 377 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 ZNF273Q14593 569 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 MAPK11Q15759 364 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 TMEM174Q8WUU8 243 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 PORCNQ9H237 461 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 UTRNP46939 3433 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 RRP8O43159 456 aaKnown RBP16.92■□□□□ 0.3
CDK11B-201ENST00000340677 PALMO75781 387 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 NDST3O95803 873 aa16.92■□□□□ 0.3
CDK11B-201ENST00000340677 TNNI1P19237 187 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms