RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 SNRNP25Q9BV90 132 aaKnown RBP13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 B3GNT4Q9C0J1 378 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 ADNPQ9H2P0 1102 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 TRNAU1APQ9NX07 287 aaKnown RBP13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 KCNK4Q9NYG8 393 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 SEPT3Q9UH03 358 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 CD84Q9UIB8 345 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 TMEM98Q9Y2Y6 226 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 PCDHGA3Q9Y5H0 932 aa13.76□□□□□ -0.21
UPK3BL1-201ENST00000340457 NPIPB15A6NHN6 443 aaPredicted RBP13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 A8MU76 341 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 TMCO5BA8MYB1 307 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 RAD1O60671 282 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 HEXIM1O94992 359 aaKnown RBP13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 CPP00450 1065 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 THRAP10827 490 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 ATP1A3P13637 1013 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 LHCGRP22888 699 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 PSMA2P25787 234 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 VIPR1P32241 457 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 HTR7P34969 479 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 ACTR1BP42025 376 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 GPR3P46089 330 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 CCR10P46092 362 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 ZNF75DP51815 510 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 ACTR1AP61163 376 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 AP1S1P61966 158 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 IL10RBQ08334 325 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 UBAP2LQ14157 1087 aaKnown RBP13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 LBRQ14739 615 aaKnown RBP13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 MARK2Q7KZI7 788 aaKnown RBP13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 PGBD5Q8N414 524 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 NEK11Q8NG66 645 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 OR4D9Q8NGE8 314 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 DTD2Q96FN9 168 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 SMIM14Q96QK8 99 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 PSKH2Q96QS6 385 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 NOD2Q9HC29 1040 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 DONSONQ9NYP3 566 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 IFNKQ9P0W0 207 aa13.75□□□□□ -0.21
UPK3BL1-201ENST00000340457 ZW10O43264 779 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 HTRA2O43464 458 aaPredicted RBP13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 CTPS1P17812 591 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 UBASH3AP57075 661 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 MAXP61244 160 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 TRAF2Q12933 501 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 TRA2AQ13595 282 aaKnown RBP eCLIP13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 ZNF235Q14590 738 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 RFTN1Q14699 578 aaPredicted RBP13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 ERMARDQ5T6L9 678 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 TMCO4Q5TGY1 634 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 ACAD10Q6JQN1 1059 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 CCDC112Q8NEF3 446 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 PDLIM2Q96JY6 352 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 DDA1Q9BW61 102 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 CDH19Q9H159 772 aa13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 LIMA1Q9UHB6 759 aaKnown RBP13.74□□□□□ -0.21
UPK3BL1-201ENST00000340457 LOC101059948A0A1B0GTJ6 334 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 ZNF891A8MT65 544 aaPredicted RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 EML2O95834 649 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 IVLP07476 585 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 DESP17661 470 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 MIPP30301 263 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 RENBPP51606 427 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 FOXK1P85037 733 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 MAMLD1Q13495 774 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 CLPPQ16740 277 aaPredicted RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 DCAF12Q5T6F0 453 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 ATP1A1-AS1Q5TC04 95 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 CYP4V2Q6ZWL3 525 aaPredicted RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 LURAP1LQ8IV03 231 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 CBARPQ8N350 705 aaPredicted RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 AHCYL2Q96HN2 611 aaKnown RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 OR2M4Q96R27 311 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 ASPSCR1Q9BZE9 553 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 XPO4Q9C0E2 1151 aaKnown RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 GPN2Q9H9Y4 310 aaPredicted RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 ETNK2Q9NVF9 386 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 CWC15Q9P013 229 aaKnown RBP13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 PILRAQ9UKJ1 303 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 SLC17A4Q9Y2C5 497 aa13.73□□□□□ -0.21
UPK3BL1-201ENST00000340457 A0A1B0GTH6 734 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 MAP3K6O95382 1288 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 SOD1P00441 154 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 PTMAP06454 111 aaKnown RBP13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 CYP2A6P11509 494 aaPredicted RBP13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 CASRP41180 1078 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 GPR1P46091 355 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 DPYSQ14117 519 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 DEFB109BQ30KR1 87 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 TMEM71Q6P5X7 295 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 TIPARPQ7Z3E1 657 aaKnown RBP13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 BMPERQ8N8U9 685 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 C9orf43Q8TAL5 461 aaPredicted RBP13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 SLC37A2Q8TED4 501 aa13.72□□□□□ -0.21
UPK3BL1-201ENST00000340457 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms