RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 WWC2-AS2Q96NR7 200 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GNRHR2Q96P88 292 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CITED1Q99966 193 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CCDC3Q9BQI4 270 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF577Q9BSK1 485 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TUBB2BQ9BVA1 445 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CPNE5Q9HCH3 593 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 DMAP1Q9NPF5 467 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SEC63Q9UGP8 760 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GGA2Q9UJY4 613 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF330Q9Y3S2 320 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MRFAP1Q9Y605 127 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CFAP46Q8IYW2 2715 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 IGHV1OR21-1A0A087WYE8 117 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 FAM237BA0A1B0GVD1 139 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 UBA6A0AVT1 1052 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ILVBLA1L0T0 632 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TSPY2A6NKD2 308 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 AHRRA9YTQ3 701 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TCP11X1B4DZS4 312 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SOCS6O14544 535 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CHUKO15111 745 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ADAM12O43184 909 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PHF1O43189 567 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 STX6O43752 255 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NRDCO43847 1150 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CREB3O43889 395 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NME2P1O60361 137 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 STX10O60499 249 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF202O95125 648 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MOCS3O95396 460 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TNFP01375 233 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ANXA1P04083 346 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PRKCBP05771 671 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 RNASE1P07998 156 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CD8BP10966 210 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ERGP11308 486 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PEPDP12955 493 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ATP1A3P13637 1013 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PLS3P13797 630 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PRF1P14222 555 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NME2P22392 152 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 RRM1P23921 792 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GABRR2P28476 465 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MLH1P40692 756 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MC3RP41968 323 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SLC5A3P53794 718 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PLOD1Q02809 727 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NFATC3Q12968 1075 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 KLF1Q13351 362 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PRPF4BQ13523 1007 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NPY5RQ15761 445 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ACKR1Q16570 336 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SPECC1LQ69YQ0 1117 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TWF2Q6IBS0 349 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 C11orf71Q6IPW1 123 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TCEAL6Q6IPX3 200 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PAOXQ6QHF9 649 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LYPD8Q6UX82 237 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CD163Q86VB7 1156 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SATL1Q86VE3 508 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZSWIM9Q86XI8 627 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 Q8N2B8 174 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ANKS4BQ8N8V4 417 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 IQUBQ8NA54 791 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF511Q8NB15 262 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NUDT8Q8WV74 236 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 KAT2AQ92830 837 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 INPP5DQ92835 1189 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TCEAL3Q969E4 200 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 HDAC10Q969S8 669 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 RMND5BQ96G75 393 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 P2RY11Q96G91 374 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 RANBP9Q96S59 729 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 KIFC3Q9BVG8 833 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SUCNR1Q9BXA5 334 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TRIM54Q9BYV2 358 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NTN4Q9HB63 628 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GCM1Q9NP62 436 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 C2orf42Q9NWW7 574 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PA2G4Q9UQ80 394 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NTNG1Q9Y2I2 539 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 RNF115Q9Y4L5 304 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PAXBP1Q9Y5B6 917 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 A0A1W2PQM1 296 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 EFCAB7A8K855 629 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TRIM77I1YAP6 450 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 DSCR3O14972 297 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SPINT1O43278 529 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PRC1O43663 620 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 HEXIM1O94992 359 aaKnown RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 ALX3O95076 343 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 LY6G6DO95868 133 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 SERPINA7P05543 415 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 MMP2P08253 660 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PLEKP08567 350 aaPredicted RBP1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TCN2P20062 427 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 TGM2P21980 687 aa1.54□□□□□ -2.16
LINC00643-201ENST00000334389 PRKCHP24723 683 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms