RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TSPAN8P19075 237 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 FMO4P31512 558 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 INHBCP55103 352 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 SMAD3P84022 425 aaKnown RBP17.36■□□□□ 0.37
DDX28-201ENST00000332395 RAB33AQ14088 237 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 UNC50Q53HI1 259 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 ZNF783Q6ZMS7 281 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 CHSY3Q70JA7 882 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 TMCO2Q7Z6W1 182 aaPredicted RBP17.36■□□□□ 0.37
DDX28-201ENST00000332395 CARNMT1Q8N4J0 409 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 PTGR2Q8N8N7 351 aaPredicted RBP17.36■□□□□ 0.37
DDX28-201ENST00000332395 RHEBL1Q8TAI7 183 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 VWCEQ96DN2 955 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 SLC22A12Q96S37 553 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 CYP2S1Q96SQ9 504 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 HERC2P3Q9BVR0 1158 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 ADGRE3Q9BY15 652 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 TRPC7Q9HCX4 862 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 MED16Q9Y2X0 877 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 PLXNA4Q9HCM2 1894 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 H0Y626 953 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 NDUFS3O75489 264 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 SRP72O76094 671 aaKnown RBP17.35■□□□□ 0.37
DDX28-201ENST00000332395 CCL5P13501 91 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 LPOP22079 712 aaPredicted RBP17.35■□□□□ 0.37
DDX28-201ENST00000332395 MZF1P28698 734 aaPredicted RBP17.35■□□□□ 0.37
DDX28-201ENST00000332395 TRAF2Q12933 501 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 KBTBD2Q8IY47 623 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 ZFAND2BQ8WV99 257 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 TCF12Q99081 682 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 CCDC68Q9H2F9 335 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 VCXQ9H320 206 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 TFB2MQ9H5Q4 396 aaKnown RBP17.35■□□□□ 0.37
DDX28-201ENST00000332395 TAS2R13Q9NYV9 303 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 FAM50BQ9Y247 325 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 UBXN8O00124 270 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 URODP06132 367 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 ARSAP15289 507 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 CLEC6AQ6EIG7 209 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 FAM117BQ6P1L5 589 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 ADGRG6Q86SQ4 1221 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 GALNT15Q8N3T1 639 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 EFHBQ8N7U6 833 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 AUTS2Q8WXX7 1259 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 TOP1MTQ969P6 601 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 TOX2Q96NM4 488 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 ATOH8Q96SQ7 321 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 SERPINI1Q99574 410 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 ZNF184Q99676 751 aaPredicted RBP17.35■□□□□ 0.37
DDX28-201ENST00000332395 EFCAB1Q9HAE3 211 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 SYTL2Q9HCH5 934 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 STK39Q9UEW8 545 aa17.35■□□□□ 0.37
DDX28-201ENST00000332395 LATS1O95835 1130 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 HSPA1AP0DMV8 641 aaKnown RBP17.34■□□□□ 0.37
DDX28-201ENST00000332395 HSPA1BP0DMV9 641 aaKnown RBP17.34■□□□□ 0.37
DDX28-201ENST00000332395 MTHFD2P13995 350 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 CDKN1CP49918 316 aaPredicted RBP17.34■□□□□ 0.37
DDX28-201ENST00000332395 EPHB3P54753 998 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 PPP1R3AQ16821 1122 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 SETMARQ53H47 684 aaPredicted RBP17.34■□□□□ 0.37
DDX28-201ENST00000332395 NCEH1Q6PIU2 408 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 PAQR3Q6TCH7 311 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 BNC2Q6ZN30 1099 aaPredicted RBP17.34■□□□□ 0.37
DDX28-201ENST00000332395 PGAM4Q8N0Y7 254 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 HIPK4Q8NE63 616 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 ZNF689Q96CS4 500 aaPredicted RBP17.34■□□□□ 0.37
DDX28-201ENST00000332395 ZNF334Q9HCZ1 680 aaPredicted RBP17.34■□□□□ 0.37
DDX28-201ENST00000332395 MRGBPQ9NV56 204 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 DLGAP2Q9P1A6 1054 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 LHX3Q9UBR4 397 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 FKBPLQ9UIM3 349 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 VPS28Q9UK41 221 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 PACSIN3Q9UKS6 424 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 LRCH1Q9Y2L9 728 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 INSL5Q9Y5Q6 135 aa17.34■□□□□ 0.37
DDX28-201ENST00000332395 SIX3O95343 332 aaPredicted RBP17.33■□□□□ 0.37
DDX28-201ENST00000332395 ENO3P13929 434 aaPredicted RBP17.33■□□□□ 0.37
DDX28-201ENST00000332395 MC4RP32245 332 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 CDH13P55290 713 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 ART3Q13508 389 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 PFKFB4Q16877 469 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 EML3Q32P44 896 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 INO80DQ53TQ3 878 aaPredicted RBP17.33■□□□□ 0.37
DDX28-201ENST00000332395 FAM219BQ5XKK7 198 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 OR52E8Q6IFG1 317 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 PSAPL1Q6NUJ1 521 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 RAB44Q7Z6P3 723 aaPredicted RBP17.33■□□□□ 0.37
DDX28-201ENST00000332395 DHDDSQ86SQ9 333 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 TCEAL8Q8IYN2 117 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.37
DDX28-201ENST00000332395 ADAMTS19Q8TE59 1207 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 CDRT15Q96T59 188 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 FEM1AQ9BSK4 669 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 DERL2Q9GZP9 239 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 PIDD1Q9HB75 910 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 TBX21Q9UL17 535 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 GBF1Q92538 1859 aa17.33■□□□□ 0.37
DDX28-201ENST00000332395 LCHNA4D1U4 455 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 UBDO15205 165 aa17.33■□□□□ 0.36
DDX28-201ENST00000332395 SQLEQ14534 574 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms