RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ROPN1LQ96C74 230 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 CAPNS2Q96L46 248 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 GPR20Q99678 358 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 EIF2AQ9BY44 585 aaKnown RBP9.65□□□□□ -0.87
PTPRA-202ENST00000318266 RHOBTB2Q9BYZ6 727 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 EHD1Q9H4M9 534 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 GOLGA2P5Q9HBQ8 144 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 MID1IP1Q9NPA3 183 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 SNTG2Q9NY99 539 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 MTRRQ9UBK8 725 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 DNAJC15Q9Y5T4 150 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 EVPLQ92817 2033 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 JRKO75564 520 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 CPNE6O95741 557 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 CSRP3P50461 194 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 SH3BP2P78314 561 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 SLC13A2Q13183 592 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 PHKG1Q16816 387 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 LCN8Q6JVE9 175 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 MIER2Q8N344 545 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 CAPSLQ8WWF8 208 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 FAR2Q96K12 515 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 TEX37Q96LM6 180 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 MROQ9BYG7 248 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 SIK2Q9H0K1 926 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 MIR1-1HGQ9H1L0 117 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 GSTO2Q9H4Y5 243 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 NOL6Q9H6R4 1146 aaKnown RBP9.64□□□□□ -0.87
PTPRA-202ENST00000318266 SMURF2Q9HAU4 748 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 HMG20AQ9NP66 347 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 KLK14Q9P0G3 267 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 GTF2IRD1Q9UHL9 959 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 BAG5Q9UL15 447 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 IGKV6-21A0A0C4DH24 114 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 SOWAHBA6NEL2 793 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 FSHRP23945 695 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 ADRA1BP35368 520 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 GSSP48637 474 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 TNFAIP2Q03169 654 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 GRSF1Q12849 480 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTPRA-202ENST00000318266 NOGQ13253 232 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 LAPTM5Q13571 262 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 DGCR6Q14129 220 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 INAQ16352 499 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 AGAP9Q5VTM2 703 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 FKBP1CQ5VVH2 108 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
PTPRA-202ENST00000318266 PDZD4Q76G19 769 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-202ENST00000318266 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 FBXO16Q8IX29 292 aaPredicted RBP9.64□□□□□ -0.87
PTPRA-202ENST00000318266 SPARTQ8N0X7 666 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 CLIP4Q8N3C7 705 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 ZCCHC7Q8N3Z6 543 aaKnown RBP9.64□□□□□ -0.87
PTPRA-202ENST00000318266 NUDT8Q8WV74 236 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 KIFC1Q9BW19 673 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 TPK1Q9H3S4 243 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 DDIT4Q9NX09 232 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 NSMCE4AQ9NXX6 385 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 AASSQ9UDR5 926 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 ATP11BQ9Y2G3 1177 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 CRYL1Q9Y2S2 319 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 TIMM22Q9Y584 194 aa9.64□□□□□ -0.87
PTPRA-202ENST00000318266 A0A1B0GTL3 188 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 PARNO95453 639 aaKnown RBP9.63□□□□□ -0.87
PTPRA-202ENST00000318266 NR4A2P43354 598 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 ADARB1P78563 741 aaKnown RBP9.63□□□□□ -0.87
PTPRA-202ENST00000318266 ZNF846Q147U1 533 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 PSMD5Q16401 504 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 BCL2A1Q16548 175 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 TIGD2Q4W5G0 525 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 PAGE3Q5JUK9 113 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 PCID2Q5JVF3 399 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 DEPDC1Q5TB30 811 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 NEPROQ6NW34 567 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 RNF19BQ6ZMZ0 732 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 SAPCD2Q86UD0 394 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 ABI1Q8IZP0 508 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 DCBLD1Q8N8Z6 715 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 SLC22A17Q8WUG5 538 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 C17orf50Q8WW18 174 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 GLMNQ92990 594 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 BIRC7Q96CA5 298 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 ITCHQ96J02 903 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 TEKT5Q96M29 485 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 HOPXQ9BPY8 73 aaPredicted RBP9.63□□□□□ -0.87
PTPRA-202ENST00000318266 TBL1YQ9BQ87 522 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 FSD1LQ9BXM9 530 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 ATP13A3Q9H7F0 1226 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 INTS7Q9NVH2 962 aaKnown RBP9.63□□□□□ -0.87
PTPRA-202ENST00000318266 RCOR3Q9P2K3 495 aaPredicted RBP9.63□□□□□ -0.87
PTPRA-202ENST00000318266 ITGB1BP2Q9UKP3 347 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 TMA7Q9Y2S6 64 aaKnown RBP9.63□□□□□ -0.87
PTPRA-202ENST00000318266 PCDHGA8Q9Y5G5 932 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 DNAH12Q6ZR08 3092 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 CITO14578 2027 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 H0Y858 1186 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 PFDN6O15212 129 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 ABCB7O75027 752 aa9.63□□□□□ -0.87
PTPRA-202ENST00000318266 NADKO95544 446 aaPredicted RBP9.63□□□□□ -0.87
PTPRA-202ENST00000318266 LTA4HP09960 611 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms