RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CALML6Q8TD86 181 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 TCP10LQ8TDR4 215 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 CENPTQ96BT3 561 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 ALKBH8Q96BT7 664 aaKnown RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 MCCC1Q96RQ3 725 aaPredicted RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 LYSMD1Q96S90 227 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 ACOX2Q99424 681 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 GPR63Q9BZJ6 419 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 TMEM245Q9H330 911 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 UBE2ZQ9H832 354 aaPredicted RBP6.96□□□□□ -1.3
PTCD2-201ENST00000308077 BRD9Q9H8M2 597 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 SNX15Q9NRS6 342 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 MKS1Q9NXB0 559 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 IL36AQ9UHA7 158 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 PHTF1Q9UMS5 762 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 PLA2G4CQ9UP65 541 aa6.96□□□□□ -1.3
PTCD2-201ENST00000308077 PLXNB3Q9ULL4 1909 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 DCHS1Q96JQ0 3298 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 C1orf232A0A0U1RR37 186 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 TSPAN11A1L157 253 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ERICH4A6NGS2 130 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 H7C0S8 307 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 GAPDHSO14556 408 aaPredicted RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 STX7O15400 261 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CD3EAPO15446 510 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 GPR39O43194 453 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 TIMM44O43615 452 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ASMTLO95671 621 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 LHCGRP22888 699 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 HMGCLP35914 325 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 IL12RB1P42701 662 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ETV4P43268 484 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CD151P48509 253 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CDKN1CP49918 316 aaPredicted RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 METAP1P53582 386 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 PDE1BQ01064 536 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SMAD4Q13485 552 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 HNRNPA1L2Q32P51 320 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 PPM1JQ5JR12 505 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 RBM20Q5T481 1227 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 EGFLAMQ63HQ2 1017 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 AFTPHQ6ULP2 937 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CRTC1Q6UUV9 634 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 KIAA0408Q6ZU52 694 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 GALNT7Q86SF2 657 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SLC41A1Q8IVJ1 513 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 NDUFAF2Q8N183 169 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 STK40Q8N2I9 435 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 OTUD6BQ8N6M0 293 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 PAF1Q8N7H5 531 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 KDM1BQ8NB78 822 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 NANOS1Q8WY41 292 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 EZH1Q92800 747 aaPredicted RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SCRN2Q96FV2 425 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SRPK1Q96SB4 655 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SLC13A1Q9BZW2 595 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ZFYVE1Q9HBF4 777 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CATSPERZQ9NTU4 200 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 NKIRAS1Q9NYS0 192 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 THAP10Q9P2Z0 257 aaPredicted RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SARDHQ9UL12 918 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SLC39A10Q9ULF5 831 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SLC8A2Q9UPR5 921 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 EDDM13A0A1B0GTR0 161 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 FAM95CA0A1B0GW59 222 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ENO4A6NNW6 628 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 COPEO14579 308 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ZWINTO95229 277 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 TIMP2P16035 220 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 OGNP20774 298 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 TYK2P29597 1187 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 MC4RP32245 332 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CA5AP35218 305 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 GRIA2P42262 883 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SERPINB8P50452 374 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 GALK1P51570 392 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 IRF9Q00978 393 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 DMTNQ08495 405 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 UGP2Q16851 508 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 TYSND1Q2T9J0 566 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 POM121L1PQ3SYA9 428 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 LRRC66Q68CR7 880 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 PSAPL1Q6NUJ1 521 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 BRAT1Q6PJG6 821 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 TXNDC11Q6PKC3 985 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 LVRNQ6Q4G3 990 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 TPRG1Q6ZUI0 275 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CEP97Q8IW35 865 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 LMNTD2Q8IXW0 634 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 PIANPQ8IYJ0 282 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ACMSDQ8TDX5 336 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 ERLEC1Q96DZ1 483 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 SGSM3Q96HU1 749 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 FAM111AQ96PZ2 611 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 FAM129BQ96TA1 746 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 FAM96AQ9H5X1 160 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CCDC134Q9H6E4 229 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 B4GALT6Q9UBX8 382 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 LHX6Q9UPM6 363 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms