RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 KLHDC7BQ96G42 594 aa21.13■□□□□ 0.97
SMCO4-201ENST00000298966 DPH1Q9BZG8 443 aa21.13■□□□□ 0.97
SMCO4-201ENST00000298966 POLR1BQ9H9Y6 1135 aa21.13■□□□□ 0.97
SMCO4-201ENST00000298966 THSD1Q9NS62 852 aa21.13■□□□□ 0.97
SMCO4-201ENST00000298966 PYCARD-AS1I3L0S3 204 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 AP3B1O00203 1094 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 NEBLO76041 1014 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 DGKAP23743 735 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 DHX9Q08211 1270 aaKnown RBP21.12■□□□□ 0.97
SMCO4-201ENST00000298966 SLC12A1Q13621 1099 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 KCNJ11Q14654 390 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 RFTN1Q14699 578 aaPredicted RBP21.12■□□□□ 0.97
SMCO4-201ENST00000298966 TRMT10CQ7L0Y3 403 aaKnown RBP21.12■□□□□ 0.97
SMCO4-201ENST00000298966 DSG4Q86SJ6 1040 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 PRUNE1Q86TP1 453 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 TRIM69Q86WT6 500 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 TP53INP2Q8IXH6 220 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 MED8Q96G25 268 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 GBA3Q9H227 469 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 SEPT10Q9P0V9 454 aa21.12■□□□□ 0.97
SMCO4-201ENST00000298966 E7EVH7 732 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 KCNK1O00180 336 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 FFAR2O15552 330 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 PLRG1O43660 514 aaKnown RBP21.11■□□□□ 0.97
SMCO4-201ENST00000298966 SLC28A2O43868 658 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 CSO75390 466 aaKnown RBP21.11■□□□□ 0.97
SMCO4-201ENST00000298966 ALPPL2P10696 532 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 CKMT1AP12532 417 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 STK19P49842 368 aaPredicted RBP21.11■□□□□ 0.97
SMCO4-201ENST00000298966 ARL4CP56559 192 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 GPS2Q13227 327 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 CFAP58Q5T655 872 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 FAM46CQ5VWP2 391 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 CENPUQ71F23 418 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 APCDD1Q8J025 514 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 PDIK1LQ8N165 341 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 FAM131CQ96AQ9 280 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 ETNK1Q9HBU6 452 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 EVA1BQ9NVM1 165 aa21.11■□□□□ 0.97
SMCO4-201ENST00000298966 KDELR3O43731 214 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 PRAMEF11O60813 436 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 WISP1O95388 367 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 MLNP12872 115 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 GEMIN4P57678 1058 aaKnown RBP21.1■□□□□ 0.97
SMCO4-201ENST00000298966 POM121L1PQ3SYA9 428 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 B4GALNT4Q76KP1 1039 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 CIR1Q86X95 450 aaPredicted RBP21.1■□□□□ 0.97
SMCO4-201ENST00000298966 ZNF354CQ86Y25 554 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 KLHDC8BQ8IXV7 354 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 IQCKQ8N0W5 287 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 TEX26Q8N6G2 289 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 SNRNP27Q8WVK2 155 aaKnown RBP21.1■□□□□ 0.97
SMCO4-201ENST00000298966 OR8D1Q8WZ84 308 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 TTC25Q96NG3 672 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 ABCG4Q9H172 646 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 XAB2Q9HCS7 855 aaKnown RBP21.1■□□□□ 0.97
SMCO4-201ENST00000298966 UCKL1Q9NWZ5 548 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 RSPH14Q9UHP6 348 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 CA5BQ9Y2D0 317 aa21.1■□□□□ 0.97
SMCO4-201ENST00000298966 AAR2Q9Y312 384 aaKnown RBP21.1■□□□□ 0.97
SMCO4-201ENST00000298966 RNGTTO60942 597 aaKnown RBP21.09■□□□□ 0.97
SMCO4-201ENST00000298966 ANXA9O76027 345 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 JCHAINP01591 159 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 THEGLP0DJG4 465 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 HSD17B3P37058 310 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 METAP1P53582 386 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 PMS2P54278 862 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 HIF1AQ16665 826 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 MARC1Q5VT66 337 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 CXorf57Q6NSI4 855 aaKnown RBP21.09■□□□□ 0.97
SMCO4-201ENST00000298966 LRIG3Q6UXM1 1119 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 FCRL5Q96RD9 977 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 ASCL3Q9NQ33 180 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 PTPN13Q12923 2485 aa21.09■□□□□ 0.97
SMCO4-201ENST00000298966 E7ESA3 106 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 C1QTNF3-AMACRE9PGA6 284 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 METTL18O95568 372 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 GP1BAP07359 652 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 APRTP07741 180 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 CES1P23141 567 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 LMAN1P49257 510 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 DUSP3P51452 185 aaPredicted RBP21.08■□□□□ 0.97
SMCO4-201ENST00000298966 PLK1P53350 603 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 SULT2A1Q06520 285 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 CNTN1Q12860 1018 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 ZBTB17Q13105 803 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 SLC14A2Q15849 920 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 UAP1Q16222 522 aaPredicted RBP21.08■□□□□ 0.97
SMCO4-201ENST00000298966 DCAF4L2Q8NA75 395 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 LRRC39Q96DD0 335 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 RBM15Q96T37 977 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMCO4-201ENST00000298966 MUC3BQ9H195 1237 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 ATP13A1Q9HD20 1204 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 RBM22Q9NW64 420 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMCO4-201ENST00000298966 ATP8A1Q9Y2Q0 1164 aa21.08■□□□□ 0.97
SMCO4-201ENST00000298966 PIAS2O75928 621 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 PEX11BO96011 259 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 TSHRP16473 764 aa21.07■□□□□ 0.96
SMCO4-201ENST00000298966 RBMS1P29558 406 aaKnown RBP21.07■□□□□ 0.96
SMCO4-201ENST00000298966 MMP13P45452 471 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms