RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CCNG1P51959 295 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 HK2P52789 917 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 TBL3Q12788 808 aaKnown RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 TAF11Q15544 211 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 PTPRNQ16849 979 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 TRMT5Q32P41 509 aaKnown RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 UNC50Q53HI1 259 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 C6orf163Q5TEZ5 329 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 Q6ZNB5 142 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 CAMK1DQ8IU85 385 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 SLC22A9Q8IVM8 553 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 BBS7Q8IWZ6 715 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 PTGR2Q8N8N7 351 aaPredicted RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 HJURPQ8NCD3 748 aaPredicted RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 ALG14Q96F25 216 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 GPR21Q99679 349 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 ZNF385DQ9H6B1 395 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 RIMKLBQ9ULI2 386 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 ATP6AP2A0A1C7CYW4 349 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 A0A1W2PRU2 124 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 TYW5A2RUC4 315 aaKnown RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 ATP6AP2O75787 350 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 FGF18O76093 207 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 C1orf53Q5VUE5 145 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 CMTR2Q8IYT2 770 aaKnown RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 ACTRT2Q8TDY3 377 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 EID2BQ96D98 161 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 NSUN5Q96P11 429 aaKnown RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 EML4Q9HC35 981 aaKnown RBP19.23■□□□□ 0.67
BRAF-201ENST00000288602 CFAP97Q9P2B7 532 aa19.23■□□□□ 0.67
BRAF-201ENST00000288602 LTBP2Q14767 1821 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 RGSL1A5PLK6 1076 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 STX7O15400 261 aaKnown RBP19.22■□□□□ 0.67
BRAF-201ENST00000288602 MTHFD2P13995 350 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 SLC26A3P40879 764 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 SUOXP51687 545 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 SLC34A1Q06495 639 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 TRIM68Q6AZZ1 485 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 KIRREL3Q8IZU9 778 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 BIRC8Q96P09 236 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 TTC1Q99614 292 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 RTKNQ9BST9 563 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 CCDC28BQ9BUN5 200 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 CCDC68Q9H2F9 335 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 INTS10Q9NVR2 710 aaKnown RBP19.22■□□□□ 0.67
BRAF-201ENST00000288602 STX18Q9P2W9 335 aaKnown RBP19.22■□□□□ 0.67
BRAF-201ENST00000288602 STOML1Q9UBI4 398 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 TRPC5OSA6NMA1 111 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 EIF4E1BA6NMX2 242 aaKnown RBP19.22■□□□□ 0.67
BRAF-201ENST00000288602 F8W8V4 182 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 LILRB3O75022 631 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 NIPSNAP2O75323 286 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 THRAP10827 490 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 PRDX6P30041 224 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 CYLC2Q14093 348 aaPredicted RBP19.22■□□□□ 0.67
BRAF-201ENST00000288602 ITIH5Q86UX2 942 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 RCN3Q96D15 328 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 MAELQ96JY0 434 aaKnown RBP19.22■□□□□ 0.67
BRAF-201ENST00000288602 EVLQ9UI08 416 aaPredicted RBP19.22■□□□□ 0.67
BRAF-201ENST00000288602 TRAF6Q9Y4K3 522 aa19.22■□□□□ 0.67
BRAF-201ENST00000288602 NCF1BA6NI72 391 aaPredicted RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 IQCF5A8MTL0 148 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 NCF1CA8MVU1 366 aaPredicted RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 A8MX80 341 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 SMIM24O75264 130 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 OLFM2O95897 454 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 TIMP1P01033 207 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 NCF1P14598 390 aaPredicted RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 CES1P23141 567 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 HERVK_113P63132 956 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 PABPC1LQ4VXU2 614 aaKnown RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 PGM2L1Q6PCE3 622 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 TAS2R42Q7RTR8 314 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 CPSF7Q8N684 471 aaKnown RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 SIDT2Q8NBJ9 832 aaKnown RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 ZNF784Q8NCA9 323 aaPredicted RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 CEP70Q8NHQ1 597 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 PYDC1Q8WXC3 89 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 CCDC97Q96F63 343 aaPredicted RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 ERVK-6Q9BXR3 956 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 ZBTB26Q9HCK0 441 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 NMRK1Q9NWW6 199 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 TAS2R13Q9NYV9 303 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 TSR3Q9UJK0 312 aaKnown RBP19.21■□□□□ 0.67
BRAF-201ENST00000288602 PTGDR2Q9Y5Y4 395 aa19.21■□□□□ 0.67
BRAF-201ENST00000288602 ZBBXA8MT70 800 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 CDC7O00311 574 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 RAG1P15918 1043 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 SH3BP2P78314 561 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 TSNQ15631 228 aaKnown RBP19.2■□□□□ 0.66
BRAF-201ENST00000288602 INO80DQ53TQ3 878 aaPredicted RBP19.2■□□□□ 0.66
BRAF-201ENST00000288602 LRRC74BQ6ZQY2 392 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 LYSMD3Q7Z3D4 306 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 MYLK4Q86YV6 388 aaPredicted RBP19.2■□□□□ 0.66
BRAF-201ENST00000288602 TTC30BQ8N4P2 665 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 RSRC1Q96IZ7 334 aaKnown RBP19.2■□□□□ 0.66
BRAF-201ENST00000288602 RPL10LQ96L21 214 aaKnown RBP19.2■□□□□ 0.66
BRAF-201ENST00000288602 ATOH8Q96SQ7 321 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 TNKS2Q9H2K2 1166 aa19.2■□□□□ 0.66
BRAF-201ENST00000288602 SARS2Q9NP81 518 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms