RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SUN2Q9UH99 717 aa14.07□□□□□ -0.16
SS18-201ENST00000269137 EMCNQ9ULC0 261 aa14.07□□□□□ -0.16
SS18-201ENST00000269137 PPM1HQ9ULR3 514 aa14.07□□□□□ -0.16
SS18-201ENST00000269137 C16orf96A6NNT2 1141 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 GAPDHSO14556 408 aaPredicted RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 PLIN3O60664 434 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 NDUFS3O75489 264 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 TOP3BO95985 862 aaKnown RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 PRSS56P0CW18 603 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 CYP2A6P11509 494 aaPredicted RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 HLA-EP13747 358 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ZNF30P17039 623 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 BPIP17213 487 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 LHCGRP22888 699 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 TNFRSF4P43489 277 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 SLC12A2P55011 1212 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 PTSQ03393 145 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ENPP2Q13822 863 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 AAK1Q2M2I8 961 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 N4BP2L1Q5TBK1 243 aaPredicted RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 HECTD2Q5U5R9 776 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 CERS6Q6ZMG9 384 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 RAPH1Q70E73 1250 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 CEP97Q8IW35 865 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 STK40Q8N2I9 435 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 PNPLA1Q8N8W4 532 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 BCAS4Q8TDM0 211 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 LPGAT1Q92604 370 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 FAM161BQ96MY7 647 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 FAM129BQ96TA1 746 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 UBE2ZQ9H832 354 aaPredicted RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 FBRSL1Q9HCM7 1045 aaKnown RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 IL26Q9NPH9 171 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ACOT9Q9Y305 439 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 SLC30A1Q9Y6M5 507 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ZNF106Q9H2Y7 1883 aaKnown RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 TICRRQ7Z2Z1 1910 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 A0A087X1B8 175 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 TCP11X1B4DZS4 312 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 C2CD4DB7Z1M9 353 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 BIRC5O15392 142 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 MBTPS2O43462 519 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 SRP72O76094 671 aaKnown RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 SAT1P21673 171 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 DRD4P21917 467 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 KCNA5P22460 613 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 VIPR1P32241 457 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 IL12RB1P42701 662 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 SOX9P48436 509 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 GALK1P51570 392 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ADARP55265 1226 aaKnown RBP14.06□□□□□ -0.16
SS18-201ENST00000269137 DBN1Q16643 649 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 CCDC153Q494R4 210 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ZRANB3Q5FWF4 1079 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 FAM45BPQ6NSW5 357 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 PSAPL1Q6NUJ1 521 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ZNF549Q6P9A3 640 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 SNX20Q7Z614 316 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 ARMC2Q8NEN0 867 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 FAM45AQ8TCE6 357 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.06□□□□□ -0.16
SS18-201ENST00000269137 NDNQ99608 321 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 OLFM1Q99784 485 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 C1QTNF1Q9BXJ1 281 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 PCDH12Q9NPG4 1184 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 CRYL1Q9Y2S2 319 aa14.06□□□□□ -0.16
SS18-201ENST00000269137 TRBV5-4A0A0C4DH59 114 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 A8MX80 341 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 PROCP04070 461 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 VIMP08670 466 aaKnown RBP14.05□□□□□ -0.16
SS18-201ENST00000269137 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
SS18-201ENST00000269137 ITGALP20701 1170 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 ITGB7P26010 798 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 SPAM1P38567 509 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 CDKN1CP49918 316 aaPredicted RBP14.05□□□□□ -0.16
SS18-201ENST00000269137 SUOXP51687 545 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 GPR33Q49SQ1 333 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 EGFLAMQ63HQ2 1017 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 DSG4Q86SJ6 1040 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 TTC7BQ86TV6 843 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 LRRC34Q8IZ02 419 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 PLD6Q8N2A8 252 aaKnown RBP14.05□□□□□ -0.16
SS18-201ENST00000269137 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 LRRC8CQ8TDW0 803 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 ZNF75CPQ92670 426 aaPredicted RBP14.05□□□□□ -0.16
SS18-201ENST00000269137 PBXIP1Q96AQ6 731 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 PLEKHG4BQ96PX9 1271 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 AARSD1Q9BTE6 412 aaKnown RBP14.05□□□□□ -0.16
SS18-201ENST00000269137 POPDC3Q9HBV1 291 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 TMEM216Q9P0N5 145 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 SARDHQ9UL12 918 aa14.05□□□□□ -0.16
SS18-201ENST00000269137 GLYATL1P3A0A0U1RQE8 302 aa14.04□□□□□ -0.16
SS18-201ENST00000269137 AGAP14A8MT82 685 aa14.04□□□□□ -0.16
SS18-201ENST00000269137 KPNA3O00505 521 aaPredicted RBP14.04□□□□□ -0.16
SS18-201ENST00000269137 NDUFAB1O14561 156 aa14.04□□□□□ -0.16
SS18-201ENST00000269137 WISP3O95389 354 aaPredicted RBP14.04□□□□□ -0.16
SS18-201ENST00000269137 PRAMEF1O95521 474 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms