RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 RAD54BQ9Y620 910 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 CCDC162PA2VCL2 907 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.27
SQLE-201ENST00000265896 IQCF5A8MTL0 148 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 ARPC2O15144 300 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 CLOCKO15516 846 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 BMP1P13497 986 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 IMPDH1P20839 514 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 HSPA13P48723 471 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 PAQR3Q6TCH7 311 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 HS3ST5Q8IZT8 346 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 AFAP1L2Q8N4X5 818 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 TFAP2CQ92754 450 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 RNF145Q96MT1 663 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 TCF12Q99081 682 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 FAM124BQ9H5Z6 455 aaPredicted RBP16.77■□□□□ 0.27
SQLE-201ENST00000265896 ARMC7Q9H6L4 198 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 POLG2Q9UHN1 485 aa16.77■□□□□ 0.27
SQLE-201ENST00000265896 FXYD1O00168 92 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 CLASP2O75122 1294 aaKnown RBP16.76■□□□□ 0.27
SQLE-201ENST00000265896 SLC6A2P23975 617 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 TXNL4AP83876 142 aaKnown RBP16.76■□□□□ 0.27
SQLE-201ENST00000265896 LAPTM5Q13571 262 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 XKR4Q5GH76 650 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 PPM1MQ96MI6 270 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 MAF1Q9H063 256 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 CDH9Q9ULB4 789 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 OTOFQ9HC10 1997 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 MGEA5O60502 916 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 HSPA8P11142 646 aaKnown RBP16.76■□□□□ 0.27
SQLE-201ENST00000265896 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
SQLE-201ENST00000265896 CRYBB1P53674 252 aaPredicted RBP16.76■□□□□ 0.27
SQLE-201ENST00000265896 NRG1Q02297 640 aaPredicted RBP16.76■□□□□ 0.27
SQLE-201ENST00000265896 OVOS1Q6IE37 1185 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 KDELC1Q6UW63 502 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 UBXN10Q96LJ8 280 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 SLC30A3Q99726 388 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 CATSPERBQ9H7T0 1116 aa16.76■□□□□ 0.27
SQLE-201ENST00000265896 AZIN1O14977 448 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 KATNA1O75449 491 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 RBP1P09455 135 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 MTPNP58546 118 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 NAA20P61599 178 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 MERTKQ12866 999 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 ATP1A4Q13733 1029 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 MAPRE2Q15555 327 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 ERMP1Q7Z2K6 904 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 PTPN18Q99952 460 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 TMEM165Q9HC07 324 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 SLC27A5Q9Y2P5 690 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 ZFC3H1O60293 1989 aaKnown RBP16.75■□□□□ 0.27
SQLE-201ENST00000265896 RBM47A0AV96 593 aaKnown RBP16.75■□□□□ 0.27
SQLE-201ENST00000265896 OR1I1O60431 355 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 PSMA4P25789 261 aaKnown RBP16.75■□□□□ 0.27
SQLE-201ENST00000265896 PCSK1P29120 753 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 TNK2Q07912 1038 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 ACAP2Q15057 778 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 UPP1Q16831 310 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 SPATA2LQ8IUW3 424 aaPredicted RBP16.75■□□□□ 0.27
SQLE-201ENST00000265896 MIER2Q8N344 545 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 ATAD1Q8NBU5 361 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 LRRC58Q96CX6 371 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 MTG1Q9BT17 334 aaPredicted RBP16.75■□□□□ 0.27
SQLE-201ENST00000265896 CXorf21Q9HAI6 301 aa16.75■□□□□ 0.27
SQLE-201ENST00000265896 NPEPPSL1A6NEC2 478 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 B4GALT3O60512 393 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 PARNO95453 639 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 MMP2P08253 660 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 SLC2A3P11169 496 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 ZNF182P17025 639 aaPredicted RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 LEPRP48357 1165 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 HERVK_113P63132 956 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 SLC2A7Q6PXP3 512 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 SNX29P2Q8IUI4 249 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 CLYBLQ8N0X4 340 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 CDYL2Q8N8U2 506 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 PCYOX1LQ8NBM8 494 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 BPIFB6Q8NFQ5 453 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 BHMTQ93088 406 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 THAP11Q96EK4 314 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 PGAP3Q96FM1 320 aaPredicted RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 SPON2Q9BUD6 331 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 ERVK-6Q9BXR3 956 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 AASSQ9UDR5 926 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 FADS3Q9Y5Q0 445 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 DNAH14Q0VDD8 3507 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 A0A0D9SEW6 157 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 MTHFD2P13995 350 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 CD1DP15813 335 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 ITGB6P18564 788 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 FASP25445 335 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 VARSP26640 1264 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 ADSLP30566 484 aaPredicted RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 POLR2IP36954 125 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 GSK3BP49841 420 aa16.74■□□□□ 0.27
SQLE-201ENST00000265896 CDK9P50750 372 aaKnown RBP16.74■□□□□ 0.27
SQLE-201ENST00000265896 DGKQP52824 942 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms