RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 C7orf43Q8WVR3 580 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 SLCO2A1Q92959 643 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 AZIN2Q96A70 460 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 EMID1Q96A84 441 aaPredicted RBP13.96□□□□□ -0.17
CDH3-201ENST00000264012 C19orf60Q96EN9 201 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 HAPLN3Q96S86 360 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 GTF2A1LQ9UNN4 478 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 PRAMEF1O95521 474 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 CNPP09543 421 aaKnown RBP13.96□□□□□ -0.17
CDH3-201ENST00000264012 TLX1P31314 330 aaPredicted RBP13.96□□□□□ -0.17
CDH3-201ENST00000264012 ZNF792Q3KQV3 632 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 HLA-DQA1Q5Y7H0 255 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 GDF6Q6KF10 455 aaPredicted RBP13.96□□□□□ -0.17
CDH3-201ENST00000264012 SPESP1Q6UW49 350 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 C8orf59Q8N0T1 100 aaPredicted RBP13.96□□□□□ -0.17
CDH3-201ENST00000264012 DCUN1D5Q9BTE7 237 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 HTATIP2Q9BUP3 242 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 ACAT2Q9BWD1 397 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 NMUR1Q9HB89 426 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 PIGVQ9NUD9 493 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 A0A0J9YYE9 177 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 GSC2O15499 205 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 BCL10O95999 233 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 HTR1BP28222 390 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 AP1S1P61966 158 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 BNIPLQ7Z465 357 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 RASAL3Q86YV0 1011 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 ZNF655Q8N720 491 aaPredicted RBP13.96□□□□□ -0.17
CDH3-201ENST00000264012 PLD4Q96BZ4 506 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 AHCYL2Q96HN2 611 aaKnown RBP13.96□□□□□ -0.17
CDH3-201ENST00000264012 SCLYQ96I15 445 aa13.96□□□□□ -0.17
CDH3-201ENST00000264012 A0A0U1RQF3 1178 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 DHRS12A0PJE2 317 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 RFXANKO14593 260 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 CDK14O94921 469 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 F2P00734 622 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 INO80DQ53TQ3 878 aaPredicted RBP13.96□□□□□ -0.18
CDH3-201ENST00000264012 TTC23Q5W5X9 447 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 GK5Q6ZS86 529 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 CHST9Q7L1S5 443 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 ARHGAP22Q7Z5H3 698 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 DENND6AQ8IWF6 608 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 ZC3H7AQ8IWR0 971 aaKnown RBP13.96□□□□□ -0.18
CDH3-201ENST00000264012 ZFP28Q8NHY6 868 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 EGFL7Q9UHF1 273 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 FCF1Q9Y324 198 aaKnown RBP13.96□□□□□ -0.18
CDH3-201ENST00000264012 STYXL1Q9Y6J8 313 aa13.96□□□□□ -0.18
CDH3-201ENST00000264012 CICQ96RK0 1608 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 TK2O00142 265 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 LIN7AO14910 233 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 EIF2S1P05198 315 aaKnown RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 ITPKAP23677 461 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 NRLP54845 237 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 PRMT2P55345 433 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 TAPT1Q6NXT6 567 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 AMIGO2Q86SJ2 522 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 ZNF605Q86T29 641 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 ZC3H3Q8IXZ2 948 aaKnown RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 NAT8LQ8N9F0 302 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 BANPQ8N9N5 519 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 PAWRQ96IZ0 340 aaKnown RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 AGAP2Q99490 1192 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 GATA5Q9BWX5 397 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 PRR23D1E9PI22 279 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 ABLIM1O14639 778 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 DLGAP3O95886 979 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 GOT2P00505 430 aaKnown RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 PRR23D2P0DMB1 279 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 IFNGR2P38484 337 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 GNA13Q14344 377 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 VWA5B1Q5TIE3 1220 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 METTL21CQ5VZV1 264 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 AAGABQ6PD74 315 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 DPP10Q8N608 796 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 ZBTB2Q8N680 514 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 RBM15BQ8NDT2 890 aaKnown RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 FAM13CQ8NE31 585 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 MCM8Q9UJA3 840 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 LINC00854A0A1B0GVQ3 168 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 A0A1W2PQ67 120 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 NRP1O14786 923 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 SIN3BO75182 1162 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 WFS1O76024 890 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 TBX18O95935 607 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 KCNE1P15382 129 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 MSX2P35548 267 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 IDH2P48735 452 aaKnown RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 BNIP1Q12981 228 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 ACAP2Q15057 778 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 ZIK1Q3SY52 487 aaPredicted RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 RGL4Q8IZJ4 473 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 SLC35F5Q8WV83 523 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 B3GALT6Q96L58 329 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 CCDC28BQ9BUN5 200 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 RHBDL2Q9NX52 303 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 FETUBQ9UGM5 382 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 TIMM22Q9Y584 194 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 SLC7A4O43246 635 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 STK16O75716 305 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms