RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GALNT7Q86SF2 657 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 FAM72BQ86X60 149 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 CLEC4FQ8N1N0 589 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 NPWQ8N729 165 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 BPIFB1Q8TDL5 484 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 CSF3RQ99062 836 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC30A3Q99726 388 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 FUNDC2Q9BWH2 189 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 TREX1Q9NSU2 369 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 ERAP1Q9NZ08 941 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 MTRRQ9UBK8 725 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 PDE10AQ9Y233 779 aa12.37□□□□□ -0.43
CHMP2B-201ENST00000263780 RLFQ13129 1914 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 UBFD1O14562 309 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 AZIN1O14977 448 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC22A1O15245 554 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 UGT2B11O75310 529 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 GMNNO75496 209 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 MTHFD1P11586 935 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 PTPN2P17706 415 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 ITIH1P19827 911 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 CCNCP24863 283 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 MRPL19P49406 292 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 DGUOKQ16854 277 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 PRR23BQ6ZRT6 265 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 OTOP3Q7RTS5 596 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 ZBTB46Q86UZ6 589 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 FAM35AQ86V20 835 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 IFNEQ86WN2 208 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 MUL1Q969V5 352 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 FKBP10Q96AY3 582 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 BIRC7Q96CA5 298 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 C3orf30Q96M34 536 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF560Q96MR9 790 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 CTRCQ99895 268 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 FICDQ9BVA6 458 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 TMEM45AQ9NWC5 275 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 MAGEL2Q9UJ55 1249 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 LEF1Q9UJU2 399 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 ATP11BQ9Y2G3 1177 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 TSPAN1O60635 241 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 RSL1D1O76021 490 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 CD4P01730 458 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 PNPLA4P41247 253 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 MLLT10P55197 1068 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 LAMC2Q13753 1193 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 SPCS2Q15005 226 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 MAPRE1Q15691 268 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 KCNJ8Q15842 424 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 ZBTB6Q15916 424 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 UNC50Q53HI1 259 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 C6orf141Q5SZD1 244 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 OTUD3Q5T2D3 398 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 SYPL2Q5VXT5 272 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 C9orf57Q5W0N0 161 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 ZCCHC7Q8N3Z6 543 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 TWIST2Q8WVJ9 160 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 TUBGCP3Q96CW5 907 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 PGAP3Q96FM1 320 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 NSMCE2Q96MF7 247 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 RNF145Q96MT1 663 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 SOX17Q9H6I2 414 aaPredicted RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 GLOD4Q9HC38 313 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 SCAF8Q9UPN6 1271 aaKnown RBP12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 DNAJC15Q9Y5T4 150 aa12.36□□□□□ -0.43
CHMP2B-201ENST00000263780 PPEF2O14830 753 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 JRKO75564 520 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 TGM1P22735 817 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 GRK3P35626 688 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 POLD3Q15054 466 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 FAM98BQ52LJ0 330 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 FBXO47Q5MNV8 452 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF362Q5T0B9 420 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 PLEKHG7Q6ZR37 379 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 EFL1Q7Z2Z2 1120 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 SLCO6A1Q86UG4 719 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 AADATQ8N5Z0 425 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 APPL2Q8NEU8 664 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 SEPHS2Q99611 448 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 MOV10Q9HCE1 1003 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 NECTIN3Q9NQS3 549 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 GDAP2Q9NXN4 497 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 TMEM98Q9Y2Y6 226 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 M0R3G1 203 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 MGEA5O60502 916 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 HUS1O60921 280 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 EEDO75530 441 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 PRSS23O95084 383 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 ALPLP05186 524 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 HGFP14210 728 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 NPR3P17342 541 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 HOXB8P17481 243 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 SHMT2P34897 504 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms