RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TRABD2AQ86V40 505 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PCDH20Q8N6Y1 951 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SLC4A11Q8NBS3 891 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 HJURPQ8NCD3 748 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BTBD9Q96Q07 612 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PANX1Q96RD7 426 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TUT1Q9H6E5 874 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BRD9Q9H8M2 597 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PAK6Q9NQU5 681 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FBXO6Q9NRD1 293 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BAIAP2Q9UQB8 552 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 COL1A2P08123 1366 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PDE2AO00408 941 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CASKO14936 926 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CCNKO75909 580 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ENDOD1O94919 500 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 NADKO95544 446 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BPGMP07738 259 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ITIH1P19827 911 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CBX5P45973 191 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TRIM32Q13049 653 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 C1orf186Q6ZWK4 172 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FETUBQ9UGM5 382 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 NPEPPSL1A6NEC2 478 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SLC30A4O14863 429 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TRBC1P01850 177 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ALDH2P05091 517 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GPIP06744 558 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 INSRRP14616 1297 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SLC39A12Q504Y0 691 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RBM20Q5T481 1227 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 THOC7Q6I9Y2 204 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ESRP1Q6NXG1 681 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FAM171BQ6P995 826 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 POTEHQ6S545 545 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 BBS12Q6ZW61 710 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CLNKQ7Z7G1 428 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TMC8Q8IU68 726 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF248Q8NDW4 579 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 OR4L1Q8NH43 312 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SLC44A1Q8WWI5 657 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FDXACB1Q9BRP7 624 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SMURF2Q9HAU4 748 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 LRRC14BA6NHZ5 514 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 F8VP50 259 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PITPNM1O00562 1244 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 REM1O75628 298 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RECQL4O94761 1208 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 COL6A2P12110 1019 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 KLRK1P26718 216 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 WEE1P30291 646 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CDC25CP30307 473 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CRADDP78560 199 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RBBP4Q09028 425 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CAMK1Q14012 370 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SPATS1Q496A3 300 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HECTD3Q5T447 861 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CXorf40AQ8TE69 158 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SOCS4Q8WXH5 440 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 LINGO1Q96FE5 620 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GBA3Q9H227 469 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CD320Q9NPF0 282 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TAS2R14Q9NYV8 317 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TRAF6Q9Y4K3 522 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HEATR1Q9H583 2144 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SPATA31A5Q5VU36 1347 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SPATA31A6Q5VVP1 1343 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SPATA31A7Q8IWB4 1347 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PRODHO43272 600 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 NR2F6P10588 404 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 NAGLUP54802 743 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RTP1P59025 263 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ITGA7Q13683 1181 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PIK3R6Q5UE93 754 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FBXL19Q6PCT2 694 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 UNC5AQ6ZN44 842 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 UNC5BQ8IZJ1 945 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PRELID2Q8N945 189 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HTRA1Q92743 480 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 C7orf26Q96N11 449 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 NDNQ99608 321 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RHOBTB2Q9BYZ6 727 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PTPRHQ9HD43 1115 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ASXL3Q9C0F0 2248 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FFAR3O14843 346 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GPR42O15529 346 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FABP3P05413 133 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PTPN1P18031 435 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CYP2B6P20813 491 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 EPHA3P29320 983 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SLC7A2P52569 658 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 C16orf46Q6P387 395 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PLET1Q6UQ28 207 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 NPNTQ6UXI9 565 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RNF19BQ6ZMZ0 732 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 LRRC55Q6ZSA7 311 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CUZD1Q86UP6 607 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CPSF7Q8N684 471 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HASPINQ8TF76 798 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms