RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 OAZ2O95190 189 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 TNFAIP8O95379 198 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 LSAMPQ13449 338 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 C11orf91Q3C1V1 193 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 KLHDC10Q6PID8 442 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 RSPO2Q6UXX9 243 aaPredicted RBP25.5■■□□□ 1.67
RAB40C-201ENST00000248139 SPPL2CQ8IUH8 684 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 OR4L1Q8NH43 312 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 GABPB2Q8TAK5 448 aaPredicted RBP25.5■■□□□ 1.67
RAB40C-201ENST00000248139 LINC01599Q8WXQ3 324 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 ZBED2Q9BTP6 218 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 CATSPERZQ9NTU4 200 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 DDX18Q9NVP1 670 aaKnown RBP25.5■■□□□ 1.67
RAB40C-201ENST00000248139 PCDHB5Q9Y5E4 795 aa25.5■■□□□ 1.67
RAB40C-201ENST00000248139 MKI67P46013 3256 aaKnown RBP25.49■■□□□ 1.67
RAB40C-201ENST00000248139 IGLV3-10A0A075B6K4 115 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 SAC3D1A6NKF1 404 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 SUPT3HB4E1H0 165 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 NT5C1B-RDH14C9J2C7 533 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 ENPP3O14638 875 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 AKAP10O43572 662 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 SUPT3HO75486 399 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 AGTR2P50052 363 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 GATMP50440 423 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 COMMD3-BMI1R4GMX3 469 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 AZIN1O14977 448 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 CLASP2O75122 1294 aaKnown RBP25.49■■□□□ 1.67
RAB40C-201ENST00000248139 PSMC3P17980 439 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 IL10RBQ08334 325 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 MBTPS1Q14703 1052 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 TSNQ15631 228 aaKnown RBP25.49■■□□□ 1.67
RAB40C-201ENST00000248139 IFNEQ86WN2 208 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 DHFR2Q86XF0 187 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 COLGALT2Q8IYK4 626 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 LGI2Q8N0V4 545 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 TADA1Q96BN2 335 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 SLC30A3Q99726 388 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 GPR62Q9BZJ7 368 aa25.49■■□□□ 1.67
RAB40C-201ENST00000248139 PDLIM1O00151 329 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 CDC7O00311 574 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 CAPNS1P04632 268 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 HGFP14210 728 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 ELNP15502 786 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 EEF1DP29692 281 aaKnown RBP25.48■■□□□ 1.67
RAB40C-201ENST00000248139 PSMD8P48556 350 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 CAP1Q01518 475 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 MAP7D1Q3KQU3 841 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 VPS33AQ96AX1 596 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 TCRBV3S1A0A5B6 114 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 ARHGEF37A1IGU5 675 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 RHOBTB1O94844 696 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 GALNT1Q10472 559 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-201ENST00000248139 TRIP4Q15650 581 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-201ENST00000248139 SETMARQ53H47 684 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-201ENST00000248139 SAMD4BQ5PRF9 694 aaKnown RBP25.48■■□□□ 1.67
RAB40C-201ENST00000248139 TMEM126BQ8IUX1 230 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 AHI1Q8N157 1196 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 DGCR14Q96DF8 476 aaKnown RBP25.48■■□□□ 1.67
RAB40C-201ENST00000248139 CDKN2AIPNLQ96HQ2 116 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 C8orf48Q96LL4 319 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 TEX37Q96LM6 180 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 ATOH8Q96SQ7 321 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 SLC2A11Q9BYW1 496 aa25.48■■□□□ 1.67
RAB40C-201ENST00000248139 SMIM31A0A1B0GVY4 71 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 SOCS2O14508 198 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 GPR39O43194 453 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 RPP40O75818 363 aaKnown RBP25.47■■□□□ 1.67
RAB40C-201ENST00000248139 SCNN1BP51168 640 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 MFSD14CQ5VZR4 134 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 MRNIPQ6NTE8 343 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 RMDN1Q96DB5 314 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 TMEM79Q9BSE2 394 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 CAAP1Q9H8G2 361 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 MED16Q9Y2X0 877 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 GREB1Q4ZG55 1949 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 H3BSA7 217 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 SCAMP3O14828 347 aaKnown RBP25.47■■□□□ 1.67
RAB40C-201ENST00000248139 DSC1Q08554 894 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 NFE2Q16621 373 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-201ENST00000248139 C8orf82Q6P1X6 216 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-201ENST00000248139 OR4K2Q8NGD2 314 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 TMIGD2Q96BF3 282 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 TRMOQ9BU70 441 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 POLG2Q9UHN1 485 aa25.47■■□□□ 1.67
RAB40C-201ENST00000248139 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-201ENST00000248139 SEPT4O43236 478 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 SLC7A1P30825 629 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 SLC6A4P31645 630 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 UGT3A1Q6NUS8 523 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 CHERPQ8IWX8 916 aaKnown RBP25.46■■□□□ 1.67
RAB40C-201ENST00000248139 ACOX2Q99424 681 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 PIF1Q9H611 641 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 ZNF696Q9H7X3 374 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 VCX3AQ9NNX9 186 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 BPIFA1Q9NP55 256 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 PRAMEF11O60813 436 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 RPS24P62847 133 aaKnown RBP25.46■■□□□ 1.67
RAB40C-201ENST00000248139 DUSP4Q13115 394 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 PHYKPLQ8IUZ5 450 aa25.46■■□□□ 1.67
RAB40C-201ENST00000248139 BRSK1Q8TDC3 778 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms