RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 CDKN1CP49918 316 aaPredicted RBP20.08■□□□□ 0.8
SNRPA-201ENST00000243563 RPS21P63220 83 aaKnown RBP20.08■□□□□ 0.8
SNRPA-201ENST00000243563 UAP1Q16222 522 aaPredicted RBP20.08■□□□□ 0.8
SNRPA-201ENST00000243563 KIAA1161Q6NSJ0 714 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 FAM151BQ6UXP7 276 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 TRIM69Q86WT6 500 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 PLA2G15Q8NCC3 412 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 NELL1Q92832 810 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 MYOCQ99972 504 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 RIOK2Q9BVS4 552 aaKnown RBP20.08■□□□□ 0.8
SNRPA-201ENST00000243563 MBNL1Q9NR56 388 aaKnown RBP20.08■□□□□ 0.8
SNRPA-201ENST00000243563 FBXO4Q9UKT5 387 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 RIMKLBQ9ULI2 386 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 CA5BQ9Y2D0 317 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 PKP3Q9Y446 797 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 FANCMQ8IYD8 2048 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 CCDC163A0A0D9SF12 145 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 MAGEB16A2A368 324 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 LRRC72A6NJI9 287 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 WNT9AO14904 365 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 RPP40O75818 363 aaKnown RBP20.07■□□□□ 0.8
SNRPA-201ENST00000243563 SOD1P00441 154 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 C1QAP02745 245 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 ANGPT1Q15389 498 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 WSCD2Q2TBF2 565 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 KIAA0895LQ68EN5 471 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 LONP2Q86WA8 852 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 SLC41A1Q8IVJ1 513 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 UHMK1Q8TAS1 419 aaKnown RBP20.07■□□□□ 0.8
SNRPA-201ENST00000243563 BIRC7Q96CA5 298 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 NUS1Q96E22 293 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 KLF6Q99612 283 aaPredicted RBP20.07■□□□□ 0.8
SNRPA-201ENST00000243563 ORAI3Q9BRQ5 295 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 SLC17A9Q9BYT1 436 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 FAM96AQ9H5X1 160 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 SMYD2Q9NRG4 433 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 PKD2L2Q9NZM6 624 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 MARCH4Q9P2E8 410 aaPredicted RBP20.07■□□□□ 0.8
SNRPA-201ENST00000243563 TMPRSS11EQ9UL52 423 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 FAM169AQ9Y6X4 670 aa20.07■□□□□ 0.8
SNRPA-201ENST00000243563 FADS2P1A8MWK0 482 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 SLC31A1O15431 190 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 FSBPO95073 299 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 VAPBO95292 243 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 ACSL3O95573 720 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 GOT2P00505 430 aaKnown RBP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 POLBP06746 335 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 SP9P0CG40 484 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 SPAM1P38567 509 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 PMS2P54278 862 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 SEMA3AQ14563 771 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 CHRNA6Q15825 494 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 USP39Q53GS9 565 aaKnown RBP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 SPANXN3Q5MJ09 141 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 HENMT1Q5T8I9 393 aaKnown RBP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 KIAA0930Q6ICG6 404 aaPredicted RBP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 NEK5Q6P3R8 708 aa20.06■□□□□ 0.8
SNRPA-201ENST00000243563 TP53I13Q8NBR0 393 aaPredicted RBP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 CCDC97Q96F63 343 aaPredicted RBP20.06■□□□□ 0.8
SNRPA-201ENST00000243563 LATO43561 262 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 HRO43593 1189 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 ERVK-10P10266 1014 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 MCM3P25205 808 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 MC4RP32245 332 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 PDE1BQ01064 536 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 RPL6Q02878 288 aaKnown RBP20.05■□□□□ 0.8
SNRPA-201ENST00000243563 EFTUD2Q15029 972 aaKnown RBP eCLIP20.05■□□□□ 0.87e-18■■■■■ 98.9
SNRPA-201ENST00000243563 IRF4Q15306 451 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 SKIDA1Q1XH10 827 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 NLRP9Q7RTR0 991 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 CYP2U1Q7Z449 544 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 PALM2Q8IXS6 379 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 CAVIN3Q969G5 261 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 TP53BP1Q12888 1972 aaPredicted RBP20.05■□□□□ 0.8
SNRPA-201ENST00000243563 SPAG17Q6Q759 2223 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 H7C0S8 307 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 UGT1A9O60656 530 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 TTC4O95801 387 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 UGT1A6P19224 532 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 UGT1A1P22309 533 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 UGT1A4P22310 534 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 FOXN2P32314 431 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 UGT1A3P35503 534 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 UGT1A5P35504 534 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 IGFALSP35858 605 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 SLMAPQ14BN4 828 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 AGERQ15109 404 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 PSAPL1Q6NUJ1 521 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 C3orf62Q6ZUJ4 267 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 PTAR1Q7Z6K3 402 aaPredicted RBP20.05■□□□□ 0.8
SNRPA-201ENST00000243563 LDB1Q86U70 411 aaPredicted RBP20.05■□□□□ 0.8
SNRPA-201ENST00000243563 PIANPQ8IYJ0 282 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 TMEFF1Q8IYR6 380 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 GSDMBQ8TAX9 411 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 PEX13Q92968 403 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 CENPTQ96BT3 561 aa20.05■□□□□ 0.8
SNRPA-201ENST00000243563 AP2M1Q96CW1 435 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms