RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 AGKQ53H12 422 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 GRHL2Q6ISB3 625 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 LYSMD3Q7Z3D4 306 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 NOA1Q8NC60 698 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 SETD7Q8WTS6 366 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 SPATA13Q96N96 652 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 F8VZ95 297 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 PGRMC2O15173 223 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 UGT2B11O75310 529 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 KCNA3P22001 575 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 UGT1A1P22309 533 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 EIF5AP63241 154 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 SQLEQ14534 574 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SNAP47Q5SQN1 464 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 MSANTD2Q6P1R3 559 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 TM9SF4Q92544 642 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 MKL1Q969V6 931 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 RTFDC1Q9BY42 306 aaPredicted RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 RETREG1Q9H6L5 497 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 IMP3Q9NV31 184 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 FAM208AQ9UK61 1670 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 ARHGEF28Q8N1W1 1705 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 AGPSO00116 658 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 TRIM38O00635 465 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SRPRAP08240 638 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 MMP3P08254 477 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 COL6A1P12109 1028 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 TCN1P20061 433 aaPredicted RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 SDHBP21912 280 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SPAM1P38567 509 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 FLT3LGP49771 235 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 HSDL1Q3SXM5 330 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 DUSP28Q4G0W2 176 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ZNF470Q6ECI4 717 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SLC25A25Q6KCM7 469 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 INTS5Q6P9B9 1019 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 C16orf59Q7L2K0 433 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 GALNT4Q8N4A0 578 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CAMKVQ8NCB2 501 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SLC4A5Q9BY07 1137 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 DCLRE1BQ9H816 532 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 IFT52Q9Y366 437 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 LYVE1Q9Y5Y7 322 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ACOT7O00154 380 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CCRL2O00421 344 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 PSMD8P48556 350 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 POU5F1Q01860 360 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 ZBTB9Q96C00 473 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 DPEP2Q9H4A9 486 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ZCCHC18P0CG32 403 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 SLC7A1P30825 629 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 DGKEP52429 567 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 HSPA14Q0VDF9 509 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 LRRC38Q5VT99 294 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 SHC4Q6S5L8 630 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 BBIP1A8MTZ0 92 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 SYNGR4O95473 234 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 RENP00797 406 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 CSTBP04080 98 aaKnown RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 CHST9Q7L1S5 443 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 CROCCP3Q8IVE0 287 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 C1orf50Q9BV19 199 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 TRIM39Q9HCM9 518 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 SPATA31D1Q6ZQQ2 1576 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 TRIM43BA6NCK2 446 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 MAFO75444 373 aaPredicted RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 PGK1P00558 417 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 NR2F6P10588 404 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 LAMP2P13473 410 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 CCL23P55773 120 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 LRRC14Q15048 493 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 GTF2IRD2BQ6EKJ0 949 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 ZBTB49Q6ZSB9 765 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 GTF2IRD2Q86UP8 949 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 ZNF606Q8WXB4 792 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 DUSP16Q9BY84 665 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 PTGES2Q9H7Z7 377 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 EPB41L4AQ9HCS5 686 aaPredicted RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 CHMP1AQ9HD42 196 aaPredicted RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 ADGRB1O14514 1584 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 RIIAD1A6NNX1 92 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 TOP3BO95985 862 aaKnown RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 ATXN1P54253 815 aaKnown RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 RGS8P57771 180 aaPredicted RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 THAP5Q7Z6K1 395 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 AMER2Q8N7J2 671 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 ZNF483Q8TF39 744 aaPredicted RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 FOXJ1Q92949 421 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 RNF31Q96EP0 1072 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 SSR3Q9UNL2 185 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 Q9Y3F1 56 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 ADAMTS13Q76LX8 1427 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 CASKO14936 926 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 DNASE1L1P49184 302 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 GPRIN3Q6ZVF9 776 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 RBM23Q86U06 439 aaKnown RBP7.41□□□□□ -1.22
MED28-201ENST00000237380 PLCZ1Q86YW0 608 aa7.41□□□□□ -1.22
MED28-201ENST00000237380 DNAJC9Q8WXX5 260 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms