RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TTYH3Q9C0H2 523 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 ELOVL2Q9NXB9 296 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 LIMD1Q9UGP4 676 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TIMP1P01033 207 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 NQO1P15559 274 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 EPORP19235 508 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 FASP25445 335 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SSR2P43308 183 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 INCA1Q0VD86 236 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 KHDRBS2Q5VWX1 349 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 C16orf87Q6PH81 154 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TTC33Q6PID6 262 aaPredicted RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 APTXQ7Z2E3 356 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SERPINA9Q86WD7 417 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 PCDH20Q8N6Y1 951 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 DNAJC9Q8WXX5 260 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 PRICKLE1Q96MT3 831 aaPredicted RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC38A3Q99624 504 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 CDH19Q9H159 772 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SORCS3Q9UPU3 1222 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 MYADML2A6NDP7 307 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 NPEPPSL1A6NEC2 478 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 RB1P06400 928 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 CDH3P22223 829 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 VHLP40337 213 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TMEM26Q6ZUK4 368 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TSEN2Q8NCE0 465 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 LCN9Q8WX39 176 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TWNKQ96RR1 684 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 BDH2Q9BUT1 245 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 EIF2B3Q9NR50 452 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 IGSF9Q9P2J2 1179 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TRPM3Q9HCF6 1732 aaPredicted RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TRBV23OR9-2A0A075B6M9 112 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 FKBP6O75344 327 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 GPR32O75388 356 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 ERAL1O75616 437 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 JAK1P23458 1154 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 LAPTM5Q13571 262 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 TRMT5Q32P41 509 aaKnown RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 ALFQ53S48 1182 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF776Q68DI1 518 aaPredicted RBP10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 C16orf62Q7Z3J2 963 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF280BQ86YH2 543 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SPATA6LQ8N4H0 392 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC35F5Q8WV83 523 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 NELL1Q92832 810 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 PWWP2AQ96N64 755 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SGK2Q9HBY8 427 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 PCDH12Q9NPG4 1184 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 GTF2A1LQ9UNN4 478 aa10.33□□□□□ -0.76
NIPAL3-201ENST00000003912 SHBGP04278 402 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 UMPSP11172 480 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 NSG1P42857 185 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 PTGER3P43115 390 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 DHPSP49366 369 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ATXN1P54253 815 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 MAPKAPK3Q16644 382 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ITPRIPL2Q3MIP1 535 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ANXA8L1Q5VT79 327 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 BRAT1Q6PJG6 821 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 TMEM220Q6QAJ8 160 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 PRR23BQ6ZRT6 265 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 RPAINQ86UA6 219 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 EID3Q8N140 333 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 CPT1BQ92523 772 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 NUS1Q96E22 293 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 HHIPL1Q96JK4 782 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 DTLQ9NZJ0 730 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 DNAJB4Q9UDY4 337 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 KLHL3Q9UH77 587 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 WNT6Q9Y6F9 365 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 WNT9AO14904 365 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 RGS20O76081 388 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 SERPINB3P29508 390 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 GJA5P36382 358 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 GHRHRQ02643 423 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 RNASEH2BQ5TBB1 312 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 TTC29Q8NA56 475 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 SEPHS2Q99611 448 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 GPR21Q99679 349 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 AARSD1Q9BTE6 412 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 LEF1Q9UJU2 399 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 MAFFQ9ULX9 164 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 VPS4AQ9UN37 437 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 PLCH1Q4KWH8 1693 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 DNAJC25-GNG10A0A024R161 153 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ERN1O75460 977 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 MT-CYBP00156 380 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 CHRNA1P02708 482 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ESR1P03372 595 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 CFIP05156 583 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 RPIAP49247 311 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 CLK1P49759 484 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 RCN1Q15293 331 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 FGD3Q5JSP0 725 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 CHST15Q7LFX5 561 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ADCK1Q86TW2 530 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 LRRC57Q8N9N7 239 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms