RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 ZSCAN26Q16670 478 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 SFTPA1Q8IWL2 248 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 PHTF2Q8N3S3 785 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 ZNF366Q8N895 744 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 SCRN2Q96FV2 425 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 KLHL32Q96NJ5 620 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 LYSMD1Q96S90 227 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 OLFM1Q99784 485 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 MECRQ9BV79 373 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 WASF2Q9Y6W5 498 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 NPIPB15A6NHN6 443 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-209ENST00000641074 A8MX80 341 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 PROCP04070 461 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 CRABP2P29373 138 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 GDI1P31150 447 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 CDKN1CP49918 316 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-209ENST00000641074 XIAPP98170 497 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 SEMG2Q02383 582 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 TAF1BQ53T94 588 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-209ENST00000641074 ARSIQ5FYB1 569 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 HECTD2Q5U5R9 776 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 FAM47EQ6ZV65 393 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 TSPAN33Q86UF1 283 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 C1QTNF1Q9BXJ1 281 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 NSRP1Q9H0G5 558 aaKnown RBP18.22■□□□□ 0.51
PHGDH-209ENST00000641074 MANSC1Q9H8J5 431 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 SLCO1B3Q9NPD5 702 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 ANKRD6Q9Y2G4 727 aa18.22■□□□□ 0.51
PHGDH-209ENST00000641074 LEFTY1O75610 366 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 CTSLP07711 333 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 BPGMP07738 259 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 SLC12A2P55011 1212 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 COL19A1Q14993 1142 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 LRIT3Q3SXY7 679 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 PSAPL1Q6NUJ1 521 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 ZNF549Q6P9A3 640 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 CRTC1Q6UUV9 634 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 PIANPQ8IYJ0 282 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 TERB1Q8NA31 727 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 CCDC63Q8NA47 563 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 CHFRQ96EP1 664 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 MCCC1Q96RQ3 725 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-209ENST00000641074 FAM96AQ9H5X1 160 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 INTS10Q9NVR2 710 aaKnown RBP18.21■□□□□ 0.51
PHGDH-209ENST00000641074 ACOT9Q9Y305 439 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 VWA7Q9Y334 891 aa18.21■□□□□ 0.51
PHGDH-209ENST00000641074 SPTBN5Q9NRC6 3674 aaKnown RBP18.2■□□□□ 0.5
PHGDH-209ENST00000641074 DENND4AQ7Z401 1863 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 A0A1W2PQ67 120 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 ECI2O75521 394 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 NEFHP12036 1026 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 BGNP21810 368 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 EIF4HQ15056 248 aaKnown RBP18.2■□□□□ 0.5
PHGDH-209ENST00000641074 ZRANB3Q5FWF4 1079 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 TPRG1Q6ZUI0 275 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 USP45Q70EL2 814 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 PIGWQ7Z7B1 504 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 TCF12Q99081 682 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 ELAC2Q9BQ52 826 aaKnown RBP18.2■□□□□ 0.5
PHGDH-209ENST00000641074 TRMT61BQ9BVS5 477 aaKnown RBP18.2■□□□□ 0.5
PHGDH-209ENST00000641074 PITPNM3Q9BZ71 974 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 BRD9Q9H8M2 597 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 SIRPGQ9P1W8 387 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 IL36AQ9UHA7 158 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 KIAA1549LQ6ZVL6 1849 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 UNC80Q8N2C7 3258 aa18.2■□□□□ 0.5
PHGDH-209ENST00000641074 BIRC5O15392 142 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 DNAJC6O75061 913 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 IGFBP4P22692 258 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 CDKN2DP55273 166 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 POLR2LP62875 67 aaKnown RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 SF3A3Q12874 501 aaKnown RBP eCLIP18.19■□□□□ 0.51e-9■■■■□ 22.2
PHGDH-209ENST00000641074 CCDC153Q494R4 210 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 FNDC3BQ53EP0 1204 aaKnown RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 LRRC73Q5JTD7 316 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 GKAP1Q5VSY0 366 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 BRAT1Q6PJG6 821 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 NUDCD3Q8IVD9 361 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 SPNS2Q8IVW8 549 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 CENPLQ8N0S6 344 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 SMRP1Q8NCR6 262 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 KCTD4Q8WVF5 259 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 SCG3Q8WXD2 468 aaKnown RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 SEC16BQ96JE7 1060 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 C19orf43Q9BQ61 176 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 TBC1D3BA6NDS4 549 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 ARNTLO00327 626 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 COL6A2P12110 1019 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 POU3F3P20264 500 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 LHCGRP22888 699 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 ILF2Q12905 390 aaKnown RBP18.19■□□□□ 0.5
PHGDH-209ENST00000641074 LRRC66Q68CR7 880 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 FAM45BPQ6NSW5 357 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 CGB2Q6NT52 195 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 KDM1BQ8NB78 822 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 FAM45AQ8TCE6 357 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 LPGAT1Q92604 370 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 TSPAN17Q96FV3 270 aa18.19■□□□□ 0.5
PHGDH-209ENST00000641074 NMRAL1Q9HBL8 299 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms