RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 POLR2LP62875 67 aaKnown RBP11.03□□□□□ -0.64
DDX41-218ENST00000625286 CDK3Q00526 305 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 TLE1Q04724 770 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 IL10RBQ08334 325 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 TRAF2Q12933 501 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 SQSTM1Q13501 440 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 DPYSQ14117 519 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 LBRQ14739 615 aaKnown RBP11.03□□□□□ -0.64
DDX41-218ENST00000625286 MAP9Q49MG5 647 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 ERMARDQ5T6L9 678 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 DENND2CQ68D51 928 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 PLEKHA7Q6IQ23 1121 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 DCUN1D2Q6PH85 259 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 SLC30A9Q6PML9 568 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 Q6ZVL8 140 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 TECPR1Q7Z6L1 1165 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 BMPERQ8N8U9 685 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 NUS1Q96E22 293 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 DTD2Q96FN9 168 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 SCARF2Q96GP6 870 aaPredicted RBP11.03□□□□□ -0.64
DDX41-218ENST00000625286 TAAR9Q96RI9 348 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 CINPQ9BW66 212 aaPredicted RBP11.03□□□□□ -0.64
DDX41-218ENST00000625286 NUP62CLQ9H1M0 184 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 NOD2Q9HC29 1040 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 TRNAU1APQ9NX07 287 aaKnown RBP11.03□□□□□ -0.64
DDX41-218ENST00000625286 LIMA1Q9UHB6 759 aaKnown RBP11.03□□□□□ -0.64
DDX41-218ENST00000625286 DACH1Q9UI36 760 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 SLC17A4Q9Y2C5 497 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 TMEM98Q9Y2Y6 226 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 PCDHB11Q9Y5F2 797 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 PCDHGA3Q9Y5H0 932 aa11.03□□□□□ -0.64
DDX41-218ENST00000625286 TEX15Q9BXT5 2789 aa11.02□□□□□ -0.64
DDX41-218ENST00000625286 TRBV23OR9-2A0A075B6M9 112 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 TMCO5BA8MYB1 307 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 STMND1H3BQB6 276 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 HGSO14964 777 aaPredicted RBP11.02□□□□□ -0.65
DDX41-218ENST00000625286 NKX2-8O15522 239 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 PDHA1P08559 390 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 THRAP10827 490 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 PSMA2P25787 234 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 IL1R2P27930 398 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 MIPP30301 263 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 VIPR1P32241 457 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 AP1S1P61966 158 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 RFTN1Q14699 578 aaPredicted RBP11.02□□□□□ -0.65
DDX41-218ENST00000625286 IGFBP7Q16270 282 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 SKIDA1Q1XH10 827 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 PPP6R3Q5H9R7 873 aaPredicted RBP11.02□□□□□ -0.65
DDX41-218ENST00000625286 FKBP15Q5T1M5 1219 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 TRIM74Q86UV6 250 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 ZNF761Q86XN6 746 aaPredicted RBP11.02□□□□□ -0.65
DDX41-218ENST00000625286 NEK11Q8NG66 645 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 OR4D9Q8NGE8 314 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 KIAA1524Q8TCG1 905 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 FNIP1Q8TF40 1166 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 ART4Q93070 314 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 ERGIC2Q96RQ1 377 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 AGAP2Q99490 1192 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 GSDMCQ9BYG8 508 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 SP110Q9HB58 689 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 PDP2Q9P2J9 529 aa11.02□□□□□ -0.65
DDX41-218ENST00000625286 LGALS16A8MUM7 142 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 DUX1O43812 170 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 MAFKO60675 156 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 PPFIA2O75334 1257 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 LRCH4O75427 683 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 IVLP07476 585 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 SFTPCP11686 197 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 AMPD1P23109 780 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 GPR3P46089 330 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 HCAR3P49019 387 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 POLE2P56282 527 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 MAXP61244 160 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 PTSQ03393 145 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 ILF3Q12906 894 aaKnown RBP eCLIP11.01□□□□□ -0.65
DDX41-218ENST00000625286 NCAPHQ15003 741 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
DDX41-218ENST00000625286 TMCO4Q5TGY1 634 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 E4F1Q66K89 784 aaPredicted RBP11.01□□□□□ -0.65
DDX41-218ENST00000625286 ANKS6Q68DC2 871 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 TXNRD3NBQ6F5E7 133 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 DOK6Q6PKX4 331 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 TIPARPQ7Z3E1 657 aaKnown RBP11.01□□□□□ -0.65
DDX41-218ENST00000625286 ZSCAN1Q8NBB4 408 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 PDCD6IPQ8WUM4 868 aaKnown RBP11.01□□□□□ -0.65
DDX41-218ENST00000625286 PIH1D2Q8WWB5 315 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 SCAMP4Q969E2 229 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 SCRN2Q96FV2 425 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 MCCC1Q96RQ3 725 aaPredicted RBP11.01□□□□□ -0.65
DDX41-218ENST00000625286 NUDCD1Q96RS6 583 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 CDH19Q9H159 772 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 EPN3Q9H201 632 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 ABCG8Q9H221 673 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 PHPT1Q9NRX4 125 aaPredicted RBP11.01□□□□□ -0.65
DDX41-218ENST00000625286 SEPT3Q9UH03 358 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 CD84Q9UIB8 345 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 PILRAQ9UKJ1 303 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 PPIL1Q9Y3C6 166 aa11.01□□□□□ -0.65
DDX41-218ENST00000625286 LOC101059948A0A1B0GTJ6 334 aa11□□□□□ -0.65
DDX41-218ENST00000625286 ANKRD62A6NC57 917 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms