RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ISL2Q96A47 359 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 VOPP1Q96AW1 172 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 CABS1Q96KC9 395 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 KLHL32Q96NJ5 620 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 SMIM14Q96QK8 99 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 MCCC1Q96RQ3 725 aaPredicted RBP7□□□□□ -1.29
CBWD3-219ENST00000622817 GPR22Q99680 433 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 IQCGQ9H095 443 aaKnown RBP7□□□□□ -1.29
CBWD3-219ENST00000622817 SUDS3Q9H7L9 328 aaPredicted RBP7□□□□□ -1.29
CBWD3-219ENST00000622817 UBE2ZQ9H832 354 aaPredicted RBP7□□□□□ -1.29
CBWD3-219ENST00000622817 ZFYVE1Q9HBF4 777 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 CATSPERZQ9NTU4 200 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 IL17CQ9P0M4 197 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 DKK3Q9UBP4 350 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 IL36AQ9UHA7 158 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 MTO1Q9Y2Z2 717 aaKnown RBP7□□□□□ -1.29
CBWD3-219ENST00000622817 WASF2Q9Y6W5 498 aa7□□□□□ -1.29
CBWD3-219ENST00000622817 C1orf232A0A0U1RR37 186 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TSPAN11A1L157 253 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 OR51F1A6NGY5 319 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 SRRM3A6NNA2 597 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 H7C0S8 307 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 NPC1O15118 1278 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 PFDN6O15212 129 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 S1PR4O95977 384 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 PRNPP04156 253 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 MPOP05164 745 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 CYP2A6P11509 494 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 KCNA5P22460 613 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 SP100P23497 879 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 PMLP29590 882 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 LSP1P33241 339 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 MAGEA12P43365 314 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TNFRSF4P43489 277 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 CLCN5P51795 746 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 NEK3P51956 506 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 ZNF234Q14588 700 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 CDKN3Q16667 212 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 FASTKD1Q53R41 847 aaKnown RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 ZNF805Q5CZA5 627 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 AARS2Q5JTZ9 985 aaKnown RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 HHATQ5VTY9 493 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 NAIF1Q69YI7 327 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 SERPINA13PQ6UXR4 307 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TPRG1Q6ZUI0 275 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TAX1BP1Q86VP1 789 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 ZSWIM9Q86XI8 627 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 CBARPQ8N350 705 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TMIEQ8NEW7 156 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TCP10LQ8TDR4 215 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 ATXN2LQ8WWM7 1075 aaKnown RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 OR8D1Q8WZ84 308 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 ATXN7L3BQ96GX2 97 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TCF12Q99081 682 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 P2RY13Q9BPV8 354 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 TMEM245Q9H330 911 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 FBXO6Q9NRD1 293 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 SNX15Q9NRS6 342 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 PCMTD2Q9NV79 361 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 MARCH4Q9P2E8 410 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 THAP10Q9P2Z0 257 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 SUN2Q9UH99 717 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 DCDC2Q9UHG0 476 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 FKBPLQ9UIM3 349 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 SLC39A10Q9ULF5 831 aa6.99□□□□□ -1.29
CBWD3-219ENST00000622817 CORO1CQ9ULV4 474 aaPredicted RBP6.99□□□□□ -1.29
CBWD3-219ENST00000622817 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 UPK3BL1B0FP48 263 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 UPK3BL2E5RIL1 263 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 MBTPS2O43462 519 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 HAUS5O94927 633 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 CLDN7O95471 211 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 ASMTLO95671 621 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 GSTA1P08263 222 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 F7P08709 466 aaPredicted RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 HNRNPLP14866 589 aaKnown RBP eCLIP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 XPAP23025 273 aaPredicted RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 CRABP2P29373 138 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 MC4RP32245 332 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 CRHR1P34998 444 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 ABCG1P45844 678 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 STC1P52823 247 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 SLC12A2P55011 1212 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 WDR4P57081 412 aaKnown RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 POU4F1Q01851 419 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 KCNC4Q03721 635 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 CACNG1Q06432 222 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 PDE1CQ14123 709 aaPredicted RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 ELAVL3Q14576 367 aaKnown RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 USP10Q14694 798 aaKnown RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 LRRC14Q15048 493 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 PTPRRQ15256 657 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 SKIV2LQ15477 1246 aaKnown RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 INSCQ1MX18 579 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 AAK1Q2M2I8 961 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 TYSND1Q2T9J0 566 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 C9orf64Q5T6V5 341 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 RNF187Q5TA31 235 aaPredicted RBP6.98□□□□□ -1.29
CBWD3-219ENST00000622817 CNSTQ6PJW8 725 aa6.98□□□□□ -1.29
CBWD3-219ENST00000622817 CRTC1Q6UUV9 634 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms