RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TBX10O75333 385 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 RAP2AP10114 183 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 MATN1P21941 496 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 CEBPAP49715 358 aaPredicted RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 KLRC3Q07444 240 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 TWF1Q12792 350 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 PIK3R6Q5UE93 754 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 LMBRD2Q68DH5 695 aaPredicted RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 HDAC2Q92769 488 aaKnown RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 IFT27Q9BW83 186 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 GON7Q9BXV9 100 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 DISP2A7MBM2 1401 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 A8MUI8 341 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 RGS6P49758 472 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 RAB5CP51148 216 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 CYP4F2P78329 520 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 CYP4F3Q08477 520 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 GPR158Q5T848 1215 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 RPTNQ6XPR3 784 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 BBS12Q6ZW61 710 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 UBR7Q8N806 425 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 SLC9A6Q92581 669 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 CERS2Q96G23 380 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 HPDLQ96IR7 371 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ADAM33Q9BZ11 813 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 FAM25EA8MYX2 175 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 STMND1H3BQB6 276 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 NUAK1O60285 661 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 NUDT7P0C024 238 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 TPSB2P20231 275 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 CXCR2P25025 360 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 SSTR1P30872 391 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 TTLL4Q14679 1199 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 TRIP11Q15643 1979 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 TPSAB1Q15661 275 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 QRICH1Q2TAL8 776 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 NKAPLQ5M9Q1 402 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ATP6V0D2Q8N8Y2 350 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 MTMR9Q96QG7 549 aa8.77□□□□□ -1.01
TTC28-208ENST00000612946 ZNF335Q9H4Z2 1342 aaPredicted RBP8.77□□□□□ -1.01
TTC28-208ENST00000612946 SLC19A2O60779 497 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 RFPL2O75678 378 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SNAP29O95721 258 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 NPPAP01160 153 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 NTSP30990 170 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 LIMK2P53671 638 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ACSBG2Q5FVE4 666 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ZNF670Q9BS34 389 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 RASSF1Q9NS23 344 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 LSM7Q9UK45 103 aaKnown RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 LYVE1Q9Y5Y7 322 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 UGT2B17O75795 530 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 RAB4BP61018 213 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 KLF10Q13118 480 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 BMPR2Q13873 1038 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ZMYND11Q15326 602 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 PHACTR4Q8IZ21 702 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 C10orf53Q8N6V4 93 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 PRELID2Q8N945 189 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 THAP6Q8TBB0 222 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CCDC106Q9BWC9 280 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 HPF1Q9NWY4 346 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 OPTCQ9UBM4 332 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 IFT52Q9Y366 437 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CHD1O14646 1710 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 RASGRP1O95267 797 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 IFNA17P01571 189 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 RLN2P04090 185 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 FABP3P05413 133 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SLC6A2P23975 617 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 LPCAT4Q643R3 524 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 MILR1Q7Z6M3 343 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 B3GALNT2Q8NCR0 500 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CEP76Q8TAP6 659 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 PCDHB12Q9Y5F1 795 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 KIF1AQ12756 1690 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 AZIN1O14977 448 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SEC22BO75396 215 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 FGRP09769 529 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 IL2P60568 153 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 IL27RAQ6UWB1 636 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ZNF567Q8N184 647 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 NUSAP1Q9BXS6 441 aaKnown RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 FARSAQ9Y285 508 aaKnown RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 MSH4O15457 936 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 C6orf222P0C671 652 aaPredicted RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 AHSA2Q719I0 299 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CBWD2Q8IUF1 395 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CPNE9Q8IYJ1 553 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SPATA6LQ8N4H0 392 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 LPAR1Q92633 364 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 GAL3ST3Q96A11 431 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 GFM1Q96RP9 751 aaKnown RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 NFKBIZQ9BYH8 718 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ZNF350Q9GZX5 532 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CDHR5Q9HBB8 845 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 GABBR1Q9UBS5 961 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms