RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 LEKR1Q6ZMV7 388 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 USP45Q70EL2 814 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 KDELC2Q7Z4H8 507 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 NOP9Q86U38 636 aaKnown RBP6.29□□□□□ -1.4
CUX1-220ENST00000607092 NLRP8Q86W28 1048 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 FAM72BQ86X60 149 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 PHF13Q86YI8 300 aaPredicted RBP6.29□□□□□ -1.4
CUX1-220ENST00000607092 COL27A1Q8IZC6 1860 aaPredicted RBP6.29□□□□□ -1.4
CUX1-220ENST00000607092 ESX1Q8N693 406 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 ART4Q93070 314 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 NUS1Q96E22 293 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 CCDC74BQ96LY2 380 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 PSKH2Q96QS6 385 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 C11orf70Q9BRQ4 267 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 NAA15Q9BXJ9 866 aaKnown RBP6.29□□□□□ -1.4
CUX1-220ENST00000607092 TEX101Q9BY14 249 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 SEMA6CQ9H3T2 930 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 RDH14Q9HBH5 336 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 FBXO8Q9NRD0 319 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 TAAR2Q9P1P5 351 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 PHTF1Q9UMS5 762 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 NEU3Q9UQ49 428 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 COQ6Q9Y2Z9 468 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 CHD5Q8TDI0 1954 aa6.29□□□□□ -1.4
CUX1-220ENST00000607092 IGHV1OR21-1A0A087WYE8 117 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 TOX3O15405 576 aaPredicted RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 TEX33O43247 280 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 B4GAT1O43505 415 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 RNF8O76064 485 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 ECEL1O95672 775 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 MT-ND3P03897 115 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 FGF1P05230 155 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 PNMA6AP0CW24 399 aaPredicted RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 FGF3P11487 239 aaPredicted RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 CCL4P13236 92 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 ATP1A3P13637 1013 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 LIFP15018 202 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 TCN2P20062 427 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 CES1P23141 567 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 CD1CP29017 333 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 VIPR1P32241 457 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 SOX5P35711 763 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 HCAR3P49019 387 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 SCNN1BP51168 640 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 EPHA4P54764 986 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 OR1D5P58170 312 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 UBE2HP62256 183 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 NFKB2Q00653 900 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 MC2RQ01718 297 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 APBA1Q02410 837 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 CLCA4Q14CN2 919 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 LACTB2Q53H82 288 aaPredicted RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 ARTNQ5T4W7 220 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 SWT1Q5T5J6 900 aaKnown RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 RAET1GQ6H3X3 334 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 TRNP1Q6NT89 227 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 WDR59Q6PJI9 974 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 HEATR4Q86WZ0 1026 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 FAM129CQ86XR2 697 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 CAMK1DQ8IU85 385 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 GALNT13Q8IUC8 556 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 PLXDC1Q8IUK5 500 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 LRRC49Q8IUZ0 686 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 NRSN1Q8IZ57 195 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 CCDC185Q8N715 623 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 TEX19Q8NA77 164 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 GPT2Q8TD30 523 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 HTR3CQ8WXA8 447 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 VOPP1Q96AW1 172 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 SCRN2Q96FV2 425 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 OR2M4Q96R27 311 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 SLC38A3Q99624 504 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 NUDT22Q9BRQ3 303 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 HERPUD2Q9BSE4 406 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 EPN3Q9H201 632 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 NOL6Q9H6R4 1146 aaKnown RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 LRRC19Q9H756 370 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 PDFQ9HBH1 243 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 LRRC4CQ9HCJ2 640 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 CHMP5Q9NZZ3 219 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 PDP2Q9P2J9 529 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 KCND3Q9UK17 655 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 NOCTQ9UK39 431 aaKnown RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 PILRAQ9UKJ1 303 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 FZD10Q9ULW2 581 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 G3BP2Q9UN86 482 aaKnown RBP6.28□□□□□ -1.4
CUX1-220ENST00000607092 SLC17A4Q9Y2C5 497 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 B3GALT1Q9Y5Z6 326 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 FHOD1Q9Y613 1164 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 ACTL7AQ9Y615 435 aa6.28□□□□□ -1.4
CUX1-220ENST00000607092 POLQO75417 2590 aa6.27□□□□□ -1.41
CUX1-220ENST00000607092 KIR2DS5A0A0G2JLQ3 304 aa6.27□□□□□ -1.41
CUX1-220ENST00000607092 A0A0G2JNG1 304 aa6.27□□□□□ -1.41
CUX1-220ENST00000607092 CLEC18AA5D8T8 446 aa6.27□□□□□ -1.41
CUX1-220ENST00000607092 ENO4A6NNW6 628 aa6.27□□□□□ -1.41
CUX1-220ENST00000607092 EFCAB7A8K855 629 aa6.27□□□□□ -1.41
CUX1-220ENST00000607092 KIR2DS3K7RE56 304 aa6.27□□□□□ -1.41
CUX1-220ENST00000607092 EEF2KO00418 725 aaKnown RBP6.27□□□□□ -1.41
CUX1-220ENST00000607092 SNPHO15079 494 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms