RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 FZD6O60353 706 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 CPP00450 1065 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 PDHA1P08559 390 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 HGFP14210 728 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 CCNB1P14635 433 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 CTPS1P17812 591 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 LHCGRP22888 699 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 TEAD1P28347 426 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 SERPINB6P35237 376 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 GARSP41250 739 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 SSR1P43307 286 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 POLD2P49005 469 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 TPM4P67936 248 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 CDK3Q00526 305 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 PTSQ03393 145 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 DPTQ07507 201 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 CLN3Q13286 438 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 KRT81Q14533 505 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 IHHQ14623 411 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 PAFAH1B3Q15102 231 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 HADHQ16836 314 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 TAF1BQ53T94 588 aaPredicted RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 CCDC122Q5T0U0 273 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 ALKBH5Q6P6C2 394 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 RFLNAQ6ZTI6 216 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 TMPRSS9Q7Z410 1059 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 SPRED1Q7Z699 444 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 TSPAN33Q86UF1 283 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 HEATR4Q86WZ0 1026 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 C17orf82Q86X59 251 aaPredicted RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 PTCD2Q8WV60 388 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 TTC9Q92623 222 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 MCCC1Q96RQ3 725 aaPredicted RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 SEMA3CQ99985 751 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 CARS2Q9HA77 564 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 NT5MQ9NPB1 228 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 TRNAU1APQ9NX07 287 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 RCOR3Q9P2K3 495 aaPredicted RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 SUFUQ9UMX1 484 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 SLC17A4Q9Y2C5 497 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 LUC7L2Q9Y383 392 aaKnown RBP7.61□□□□□ -1.19
CUX1-219ENST00000606749 PCDHGA7Q9Y5G6 932 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
CUX1-219ENST00000606749 FASNP49327 2511 aaKnown RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 UNC13CQ8NB66 2214 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 GOLGA6CA6NDK9 693 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 GOLGA6BA6NDN3 693 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 MATN3O15232 486 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 NVLO15381 856 aaKnown RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 MFSD11O43934 449 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ECEL1O95672 775 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 PRLP01236 227 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 GYPCP04921 128 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 IVLP07476 585 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 JMJD7P0C870 316 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 GOLGA6DP0CG33 693 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 CES1P23141 567 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 CCNCP24863 283 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 AK4P27144 223 aaPredicted RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 ALDH4A1P30038 563 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ADCY8P40145 1251 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 GNPDA1P46926 289 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 MAZP56270 477 aaKnown RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 OR1D5P58170 312 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 CFHR1Q03591 330 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ITKQ08881 620 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 GALNT2Q10471 571 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ILF3Q12906 894 aaKnown RBP eCLIP7.6□□□□□ -1.196e-11■■■■■ 27.8
CUX1-219ENST00000606749 DPYSL3Q14195 570 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ANKRD20A8PQ5CZ79 823 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 NCBP2-AS2Q69YL0 99 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 RAET1GQ6H3X3 334 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 TIGD7Q6NT04 549 aaPredicted RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 CCDC81Q6ZN84 652 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 USP53Q70EK8 1073 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 USP45Q70EL2 814 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ZNF438Q7Z4V0 828 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 PIM3Q86V86 326 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 NLRP8Q86W28 1048 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 CPNE8Q86YQ8 564 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 SLITRK4Q8IW52 837 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 NDUFAF2Q8N183 169 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 KCTD6Q8NC69 237 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ZNF564Q8TBZ8 553 aaPredicted RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 KIAA1524Q8TCG1 905 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ZDHHC1Q8WTX9 485 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 MAML1Q92585 1016 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 FATE1Q969F0 183 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 TMEM159Q96B96 161 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 IQCDQ96DY2 449 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 TSGA13Q96PP4 275 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 SMIM14Q96QK8 99 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 CCNL2Q96S94 520 aaPredicted RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 GSDMCQ9BYG8 508 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 POLR1EQ9GZS1 481 aaKnown RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 ABCG8Q9H221 673 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 SEMA6CQ9H3T2 930 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 SUDS3Q9H7L9 328 aaPredicted RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 RBM22Q9NW64 420 aaKnown RBP eCLIP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms