RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 MYL4P12829 197 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 CD1DP15813 335 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 ZNF37AP17032 561 aaPredicted RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 CTPS1P17812 591 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 OGNP20774 298 aaKnown RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 SP100P23497 879 aaPredicted RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 DNAJB13P59910 316 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 TBCCQ15814 346 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 INO80DQ53TQ3 878 aaPredicted RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 ACSBG2Q5FVE4 666 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 RALGPS1Q5JS13 557 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 SH2D4BQ5SQS7 431 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 ZNF783Q6ZMS7 281 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 CAMK1DQ8IU85 385 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 TTC30BQ8N4P2 665 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 NAT14Q8WUY8 206 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 LPGAT1Q92604 370 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 EXT2Q93063 718 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 MARK4Q96L34 752 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 CORO1BQ9BR76 489 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 THTPAQ9BU02 230 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 CCL26Q9Y258 94 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 LRRC14BA6NHZ5 514 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 C2orf81A6NN90 581 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 FZD6O60353 706 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 NPHS1O60500 1241 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 EFCAB14O75071 495 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 RBP1P09455 135 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 LPOP22079 712 aaPredicted RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 CD70P32970 193 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 SUOXP51687 545 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 KPNA2P52292 529 aaKnown RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 MXRA7P84157 204 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 SULT2A1Q06520 285 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 LMAN2Q12907 356 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 OR4D1Q15615 310 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 WASHC2DQ5SRD0 308 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 KLC3Q6P597 504 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 FBXO46Q6PJ61 603 aaPredicted RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 FRMD7Q6ZUT3 714 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 PIWIL4Q7Z3Z4 852 aaKnown RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 SDCCAG8Q86SQ7 713 aaPredicted RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 FIBCD1Q8N539 461 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 DCAF4L2Q8NA75 395 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 KREMEN2Q8NCW0 462 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 ARMC5Q96C12 935 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 CCDC97Q96F63 343 aaPredicted RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 FAM161BQ96MY7 647 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 SLC30A3Q99726 388 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 RNPEPL1Q9HAU8 725 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 IL23AQ9NPF7 189 aa14.45□□□□□ -0.1
VRK3-217ENST00000599538 INTS6Q9UL03 887 aaKnown RBP14.45□□□□□ -0.1
VRK3-217ENST00000599538 UBFD1O14562 309 aaKnown RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 BAIAP3O94812 1187 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 PSMA3P25788 255 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 MC4RP32245 332 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 SERPINB5P36952 375 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 SLC7A9P82251 487 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 HTRA4P83105 476 aaPredicted RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 KLF10Q13118 480 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 ICE2Q659A1 982 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 PAQR3Q6TCH7 311 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 AFTPHQ6ULP2 937 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 HTR3DQ70Z44 454 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 KCNV2Q8TDN2 545 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 TCEAL4Q96EI5 215 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 RPL10LQ96L21 214 aaKnown RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 BIRC8Q96P09 236 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 ADGRE3Q9BY15 652 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 TLR9Q9NR96 1032 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 GTSE1Q9NYZ3 720 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 EVLQ9UI08 416 aaPredicted RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 SH3BP1Q9Y3L3 701 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 ASB3Q9Y575 518 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 ANKRD12Q6UB98 2062 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 TYW5A2RUC4 315 aaKnown RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 LEFTY2O00292 366 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 SKAP2O75563 359 aaPredicted RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 RFPL2O75678 378 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 SORBS2O94875 1100 aaKnown RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 ANP32DO95626 131 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 TPBGLP0DKB5 382 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 CES1P23141 567 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 CA5AP35218 305 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 NAA25Q14CX7 972 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 PPM1LQ5SGD2 360 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 LENG8Q96PV6 779 aaPredicted RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 TCF25Q9BQ70 676 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 TNKS2Q9H2K2 1166 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 GSTO2Q9H4Y5 243 aa14.44□□□□□ -0.1
VRK3-217ENST00000599538 LSM7Q9UK45 103 aaKnown RBP14.44□□□□□ -0.1
VRK3-217ENST00000599538 CHD9Q3L8U1 2897 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 GBF1Q92538 1859 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 UBXN8O00124 270 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 PPP6CO00743 305 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 ZNF821O75541 412 aaPredicted RBP14.43□□□□□ -0.1
VRK3-217ENST00000599538 TM7SF2O76062 418 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 RHOBTB1O94844 696 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 SIX3O95343 332 aaPredicted RBP14.43□□□□□ -0.1
VRK3-217ENST00000599538 MTHFD2P13995 350 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms