RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 OLIG2Q13516 323 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 ZNF423Q2M1K9 1284 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 PRAMEF14Q5SWL7 426 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 KCTD11Q693B1 232 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 PNCKQ6P2M8 343 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 C4orf22Q6V702 233 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 NYAP1Q6ZVC0 841 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 RAVER1Q8IY67 606 aaKnown RBP14.34□□□□□ -0.11
LIG1-208ENST00000595758 NRSN1Q8IZ57 195 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 PDCD7Q8N8D1 485 aaKnown RBP14.34□□□□□ -0.11
LIG1-208ENST00000595758 PLA2G15Q8NCC3 412 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 NETO1Q8TDF5 533 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 AP2M1Q96CW1 435 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 ABCG8Q9H221 673 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 TRABDQ9H4I3 376 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 ERVMER34-1Q9H9K5 563 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 IL21RQ9HBE5 538 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 RAB6BQ9NRW1 208 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
LIG1-208ENST00000595758 HACD3Q9P035 362 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 FEZ2Q9UHY8 353 aaPredicted RBP14.34□□□□□ -0.11
LIG1-208ENST00000595758 CEP250Q9BV73 2442 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 LRRK1Q38SD2 2015 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 ERI2A8K979 691 aaKnown RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 E7EVH7 732 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 AP2A1O95782 977 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 SLC4A1P02730 911 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 PAFAH1B1P43034 410 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 SPINT3P49223 89 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 LMAN1P49257 510 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 LIMK1P53667 647 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 DPTQ07507 201 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 PDE1CQ14123 709 aaPredicted RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 PTK2BQ14289 1009 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 UAP1L1Q3KQV9 507 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 DENND5AQ6IQ26 1287 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 ESRP1Q6NXG1 681 aaKnown RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 CCDC137Q6PK04 289 aaKnown RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 ZNF765Q7L2R6 523 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 TMC3Q7Z5M5 1100 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 NLRP8Q86W28 1048 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 SLC22A18ASQ8N1D0 253 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 OXR1Q8N573 874 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 BLOC1S5Q8TDH9 187 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 SCAMP4Q969E2 229 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 EID2BQ96D98 161 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 C16orf45Q96MC5 204 aaPredicted RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 ELF4Q99607 663 aaPredicted RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 APOOQ9BUR5 198 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 FAM83DQ9H4H8 585 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 ARNT2Q9HBZ2 717 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 GPR27Q9NS67 375 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 DNAAF2Q9NVR5 837 aaKnown RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 RNF14Q9UBS8 474 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 CD84Q9UIB8 345 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 FNDC3AQ9Y2H6 1198 aaKnown RBP14.33□□□□□ -0.12
LIG1-208ENST00000595758 OR1A2Q9Y585 309 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 ADAMTS9Q9P2N4 1935 aa14.33□□□□□ -0.12
LIG1-208ENST00000595758 SPTY2D1-AS1A0A0U1RR47 76 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 K7ESM1 405 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 AURKAO14965 403 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 KRT14P02533 472 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 TSHRP16473 764 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 TRIM23P36406 574 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 FNTAP49354 379 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 ARRB1P49407 418 aaPredicted RBP14.32□□□□□ -0.12
LIG1-208ENST00000595758 SEMA5AQ13591 1074 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 FZD2Q14332 565 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 TRIP13Q15645 432 aaPredicted RBP14.32□□□□□ -0.12
LIG1-208ENST00000595758 TPRG1LQ5T0D9 272 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 RAET1GQ6H3X3 334 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 LINC00523Q86TU6 105 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 PELI3Q8N2H9 469 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 TTC30BQ8N4P2 665 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 GRK7Q8WTQ7 553 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 RIOK2Q9BVS4 552 aaKnown RBP14.32□□□□□ -0.12
LIG1-208ENST00000595758 CDH19Q9H159 772 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 WDR26Q9H7D7 661 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 RAD18Q9NS91 495 aa14.32□□□□□ -0.12
LIG1-208ENST00000595758 CDV3Q9UKY7 258 aaKnown RBP14.32□□□□□ -0.12
LIG1-208ENST00000595758 CABIN1Q9Y6J0 2220 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 A0A1B0GTQ1 180 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 CACNB4O00305 520 aaPredicted RBP14.31□□□□□ -0.12
LIG1-208ENST00000595758 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
LIG1-208ENST00000595758 SUN1O94901 812 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 GAS8O95995 478 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 PYGLP06737 847 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 APRTP07741 180 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 HOXC4P09017 264 aaPredicted RBP14.31□□□□□ -0.12
LIG1-208ENST00000595758 ZNF883P0CG24 379 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 SDHBP21912 280 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 HTR1BP28222 390 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 TEAD1P28347 426 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 HMGCLP35914 325 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 GPR1P46091 355 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 RXRGP48443 463 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 CCT8P50990 548 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 NFATC4Q14934 902 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms