RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 PRLP01236 227 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 HOXC4P09017 264 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-205ENST00000595028 MYCLP1P12525 358 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-205ENST00000595028 TSHRP16473 764 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 ZNF30P17039 623 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 KELP23276 732 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 CTNNA1P35221 906 aaKnown RBP15.1■□□□□ 0.01
TRIM28-205ENST00000595028 TRIM23P36406 574 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 CLDN6P56747 220 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 SRP54P61011 504 aaKnown RBP15.1■□□□□ 0.01
TRIM28-205ENST00000595028 SKOR1P84550 965 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 ADCY2Q08462 1091 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 C1orf61Q13536 156 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 LLGL1Q15334 1064 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 PPP2R5EQ16537 467 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 HES3Q5TGS1 186 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 KAZNQ674X7 775 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 KCTD16Q68DU8 428 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 PNCKQ6P2M8 343 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 ENPP7Q6UWV6 458 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 Q6ZVL8 140 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 BZW1Q7L1Q6 419 aaKnown RBP15.1■□□□□ 0.01
TRIM28-205ENST00000595028 MARCH9Q86YJ5 346 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 CCDC50Q8IVM0 306 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 SPC24Q8NBT2 197 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 LPCAT1Q8NF37 534 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 EXD1Q8NHP7 514 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 TSACCQ96A04 125 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-205ENST00000595028 LACRTQ9GZZ8 138 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 CLPBQ9H078 707 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 PCDH9Q9HC56 1237 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 FGF22Q9HCT0 170 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 SEPT10Q9P0V9 454 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 DNPEPQ9ULA0 475 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 RP1P56715 2156 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 HECTD1Q9ULT8 2610 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 TMEM202A6NGA9 273 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 ANXA6P08133 673 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 CELA2BP08218 269 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-205ENST00000595028 MYF5P13349 255 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 PLA2G2AP14555 144 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 TEAD1P28347 426 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 DUSP3P51452 185 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-205ENST00000595028 ELOCQ15369 112 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 SLC14A2Q15849 920 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 C6orf132Q5T0Z8 1188 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 CRTC1Q6UUV9 634 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 TECPR1Q7Z6L1 1165 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 KIAA1328Q86T90 577 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 HEATR4Q86WZ0 1026 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 RCOR2Q8IZ40 523 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 OR56A4Q8NGH8 313 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 OR1E3Q8WZA6 343 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 IMP4Q96G21 291 aaKnown RBP15.09■□□□□ 0.01
TRIM28-205ENST00000595028 UBL7Q96S82 380 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-205ENST00000595028 LYSMD1Q96S90 227 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 BOCQ9BWV1 1114 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 LGR4Q9BXB1 951 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 PHPT1Q9NRX4 125 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-205ENST00000595028 NCKIPSDQ9NZQ3 722 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 SAE1Q9UBE0 346 aaPredicted RBP15.09■□□□□ 0.01
TRIM28-205ENST00000595028 DGKBQ9Y6T7 804 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 DUSP10Q9Y6W6 482 aa15.09■□□□□ 0.01
TRIM28-205ENST00000595028 COL27A1Q8IZC6 1860 aaPredicted RBP15.08■□□□□ 0.01
TRIM28-205ENST00000595028 A0A0U1RQS6 177 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 TNFRSF10CO14798 259 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 YY2O15391 372 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 GP1BAP07359 652 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 PTPN3P26045 913 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 STC1P52823 247 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 NAP1L1P55209 391 aaKnown RBP15.08■□□□□ 0
TRIM28-205ENST00000595028 E2F1Q01094 437 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 INSM1Q01101 510 aaPredicted RBP15.08■□□□□ 0
TRIM28-205ENST00000595028 DPTQ07507 201 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 CAMK2BQ13554 666 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 QPCTQ16769 361 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 FAM182AQ5T1J6 154 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 RAET1GQ6H3X3 334 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 B4GALNT4Q76KP1 1039 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 RD3Q7Z3Z2 195 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 LRRC57Q8N9N7 239 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 TFB1MQ8WVM0 346 aaKnown RBP15.08■□□□□ 0
TRIM28-205ENST00000595028 SLC39A7Q92504 469 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 P3H4Q92791 437 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 HAUS1Q96CS2 278 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 AGAP3Q96P47 875 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 QKIQ96PU8 341 aaKnown RBP eCLIP15.08■□□□□ 0
TRIM28-205ENST00000595028 TRIB3Q96RU7 358 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 RBM15Q96T37 977 aaKnown RBP eCLIP15.08■□□□□ 01e-9■□□□□ 10.8
TRIM28-205ENST00000595028 DESI2Q9BSY9 194 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 TEX101Q9BY14 249 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 SLC25A51Q9H1U9 297 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 DKK4Q9UBT3 224 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 MYO18BQ8IUG5 2567 aa15.08■□□□□ 0
TRIM28-205ENST00000595028 SCN8AQ9UQD0 1980 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 ARHGEF17Q96PE2 2063 aaPredicted RBP15.07■□□□□ 0
TRIM28-205ENST00000595028 CCDC66A2RUB6 948 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 GRID2IPA4D2P6 1211 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 GOLGA6CA6NDK9 693 aa15.07■□□□□ 0
TRIM28-205ENST00000595028 GOLGA6BA6NDN3 693 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms