RNA–Protein interactions for RNA: ENST00000594792.5

U2AF1L4-219, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-219	ENST00000594792	GALNT3	Q14435	633 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	KIF26B	Q2KJY2	2108 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	C11orf63	Q6NUN7	778 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	USP45	Q70EL2	814 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CCDC170	Q8IYT3	715 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PDCD7	Q8N8D1	485 aa	Known RBP	11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ACRBP	Q8NEB7	543 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	SCAMP4	Q969E2	229 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TADA1	Q96BN2	335 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	EID2B	Q96D98	161 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TRIB3	Q96RU7	358 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	WDR24	Q96S15	920 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	LACRT	Q9GZZ8	138 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TMEM168	Q9H0V1	697 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ABCG8	Q9H221	673 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PCDH9	Q9HC56	1237 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	DDX56	Q9NY93	547 aa	Known RBP	11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	SIRPG	Q9P1W8	387 aa		11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.13	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PRSS38	A1L453	326 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CACNB4	O00305	520 aa	Predicted RBP	11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CST8	O60676	142 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CLDN7	O95471	211 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	MT-CO3	P00414	261 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ANXA6	P08133	673 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	HOXC4	P09017	264 aa	Predicted RBP	11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PTPN3	P26045	913 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	HTR1B	P28222	390 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	POLD2	P49005	469 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	STC1	P52823	247 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	DPT	Q07507	201 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	WASHC5	Q12768	1159 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ELOC	Q15369	112 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	NR0B2	Q15466	257 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	QPCT	Q16769	361 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	HS1BP3	Q53T59	392 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TRIM74	Q86UV6	250 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	NRROS	Q86YC3	692 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	KATNAL2	Q8IYT4	538 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	FSTL5	Q8N475	847 aa	Predicted RBP	11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	SPATA22	Q8NHS9	363 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	IMP4	Q96G21	291 aa	Known RBP	11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ZNF830	Q96NB3	372 aa	Predicted RBP	11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	AGAP3	Q96P47	875 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	LYSMD1	Q96S90	227 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	USP29	Q9HBJ7	922 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CYP4F12	Q9HCS2	524 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TRIM10	Q9UDY6	481 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GPSM3	Q9Y4H4	160 aa		11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GOLGA4	Q13439	2230 aa	Known RBP	11.12	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	FADS2P1	A8MWK0	482 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TNFRSF10C	O14798	259 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TLX3	O43711	291 aa	Predicted RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	NOBOX	O60393	691 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CS	O75390	466 aa	Known RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	MT-CYB	P00156	380 aa	Predicted RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PIRT	P0C851	137 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CTSE	P14091	401 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CD68	P34810	354 aa	Predicted RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CTNNA1	P35221	906 aa	Known RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CYLC1	P35663	651 aa	Predicted RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	BLK	P51451	505 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	E2F1	Q01094	437 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ARHGEF7	Q14155	803 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	RTP5	Q14D33	572 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PDK1	Q15118	436 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	KAZN	Q674X7	775 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	RAET1G	Q6H3X3	334 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	AADACL2	Q6P093	401 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CACTIN-AS1	Q8N1I8	211 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ARL10	Q8N8L6	244 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GPR156	Q8NFN8	814 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	MAPK15	Q8TD08	544 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CCDC74A	Q96AQ1	378 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	HAUS1	Q96CS2	278 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	AP2M1	Q96CW1	435 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	NXPE2	Q96DL1	559 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	CCDC3	Q9BQI4	270 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GORASP1	Q9BQQ3	440 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	C10orf88	Q9H8K7	445 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	SEPT10	Q9P0V9	454 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	SLC17A4	Q9Y2C5	497 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PLEKHM1	Q9Y4G2	1056 aa		11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	FLNB	O75369	2602 aa	Known RBP	11.11	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	APC2	O95996	2303 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	C1orf232	A0A0U1RR37	186 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GRID2IP	A4D2P6	1211 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GOLGA6C	A6NDK9	693 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GOLGA6B	A6NDN3	693 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	ANKRD66	B4E2M5	251 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	PPP1R12A	O14974	1030 aa	Predicted RBP	11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	BRINP1	O60477	761 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	TNF	P01375	233 aa		11.1	□□□□□ -0.63
U2AF1L4-219	ENST00000594792	GOLGA6D	P0CG33	693 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms