RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 HAUS2Q9NVX0 235 aa16.15■□□□□ 0.18
CIRBP-241ENST00000593048 WDR70Q9NW82 654 aa16.15■□□□□ 0.18
CIRBP-241ENST00000593048 PTPRQQ9UMZ3 2332 aa16.15■□□□□ 0.18
CIRBP-241ENST00000593048 TTLL3Q9Y4R7 772 aa16.15■□□□□ 0.18
CIRBP-241ENST00000593048 A0A1W2PNU3 283 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-241ENST00000593048 NPIPB15A6NHN6 443 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-241ENST00000593048 PSMD11O00231 422 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 PGLSO95336 258 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 CD48P09326 243 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 CTPS1P17812 591 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 IL4RP24394 825 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 GARSP41250 739 aaKnown RBP16.14■□□□□ 0.17
CIRBP-241ENST00000593048 EPHB1P54762 984 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 INHBCP55103 352 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 C14orf28Q4W4Y0 310 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 OGFOD3Q6PK18 319 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 HSD11B1LQ7Z5J1 315 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 HEATR4Q86WZ0 1026 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 CCNJLQ8IV13 435 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 MAP7D3Q8IWC1 876 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 PELI3Q8N2H9 469 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 FBXO39Q8N4B4 442 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.14■□□□□ 0.17
CIRBP-241ENST00000593048 CCL4L1Q8NHW4 92 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 CTNNBL1Q8WYA6 563 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-241ENST00000593048 SLC39A7Q92504 469 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 DTD2Q96FN9 168 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 SCRN2Q96FV2 425 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 LIN37Q96GY3 246 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-241ENST00000593048 TMEM74Q96NL1 305 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 SEMA3CQ99985 751 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 FOXP3Q9BZS1 431 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 POLR1EQ9GZS1 481 aaKnown RBP16.14■□□□□ 0.17
CIRBP-241ENST00000593048 LRIT1Q9P2V4 623 aa16.14■□□□□ 0.17
CIRBP-241ENST00000593048 LRRK1Q38SD2 2015 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 D6RAR5 112 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 MFSD11O43934 449 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 H2AFZP0C0S5 128 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 LHCGRP22888 699 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 HNRNPH3P31942 346 aaKnown RBP16.13■□□□□ 0.17
CIRBP-241ENST00000593048 MLLT3P42568 568 aaPredicted RBP16.13■□□□□ 0.17
CIRBP-241ENST00000593048 PDX1P52945 283 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 ILF3Q12906 894 aaKnown RBP eCLIP16.13■□□□□ 0.17
CIRBP-241ENST00000593048 EIF3IQ13347 325 aaKnown RBP16.13■□□□□ 0.17
CIRBP-241ENST00000593048 BIRC2Q13490 618 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 DPYSL3Q14195 570 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 PDK2Q15119 407 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 ATP13A4Q4VNC1 1196 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 ANKRD20A8PQ5CZ79 823 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 CERCAMQ5T4B2 595 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 ARHGAP40Q5TG30 622 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 Q6ZVL8 140 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 H2AFVQ71UI9 128 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 RAB11FIP2Q7L804 512 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 B3GNT8Q7Z7M8 397 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 TSPAN33Q86UF1 283 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 TEX26Q8N6G2 289 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 FAM71BQ8TC56 605 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 PRR11Q96HE9 360 aaPredicted RBP16.13■□□□□ 0.17
CIRBP-241ENST00000593048 DNAJC7Q99615 494 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 TEX101Q9BY14 249 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 GSDMCQ9BYG8 508 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 DEF6Q9H4E7 631 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 CPNE5Q9HCH3 593 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 ZNHIT6Q9NWK9 470 aaKnown RBP16.13■□□□□ 0.17
CIRBP-241ENST00000593048 UVRAGQ9P2Y5 699 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 APPL1Q9UKG1 709 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 PYCARDQ9ULZ3 195 aa16.13■□□□□ 0.17
CIRBP-241ENST00000593048 SETXQ7Z333 2677 aaKnown RBP16.12■□□□□ 0.17
CIRBP-241ENST00000593048 A0A1W2PQM1 296 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 PMS2P1A4D2B8 440 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 TK2O00142 265 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 PLD2O14939 933 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 MATN3O15232 486 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 ATXN7O15265 892 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-241ENST00000593048 NOBOXO60393 691 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 PROSCO94903 275 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 MAP3K6O95382 1288 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 CEACAM5P06731 702 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 KRT7P08729 469 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 CCNB1P14635 433 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 PNLIPP16233 465 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 CES1P23141 567 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 GPR1P46091 355 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 GNPDA1P46926 289 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 CDK3Q00526 305 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 GALNT2Q10471 571 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 PAFAH1B3Q15102 231 aaKnown RBP16.12■□□□□ 0.17
CIRBP-241ENST00000593048 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
CIRBP-241ENST00000593048 NCBP2-AS2Q69YL0 99 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 JAMLQ86YT9 394 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 ZDHHC1Q8WTX9 485 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 PIH1D2Q8WWB5 315 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 ZNF670Q9BS34 389 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 ABHD10Q9NUJ1 306 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 RBM22Q9NW64 420 aaKnown RBP eCLIP16.12■□□□□ 0.178e-6■□□□□ 10.3
CIRBP-241ENST00000593048 LCMT1Q9UIC8 334 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 SUFUQ9UMX1 484 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 RNF215Q9Y6U7 377 aa16.12■□□□□ 0.17
CIRBP-241ENST00000593048 CDRT15L2A8MXV6 281 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms