RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SCARF2Q96GP6 870 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-205ENST00000592333 FUCA2Q9BTY2 467 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 THAP2Q9H0W7 228 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 CARS2Q9HA77 564 aaKnown RBP18.85■□□□□ 0.61
CCDC43-205ENST00000592333 SLC17A4Q9Y2C5 497 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 RNF215Q9Y6U7 377 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 ATMQ13315 3056 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 A8MX80 341 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 FZD6O60353 706 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 CPNE6O95741 557 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 IVLP07476 585 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 JMJD7P0C870 316 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 PBX1P40424 430 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 GPR3P46089 330 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 B4GALNT1Q00973 533 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 TRAF2Q12933 501 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 NYAP1Q6ZVC0 841 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 ZNF765Q7L2R6 523 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 TECPR1Q7Z6L1 1165 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 PIH1D2Q8WWB5 315 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 DPYSL5Q9BPU6 564 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.84■□□□□ 0.61
CCDC43-205ENST00000592333 POLR1EQ9GZS1 481 aaKnown RBP18.84■□□□□ 0.61
CCDC43-205ENST00000592333 AKAP7Q9P0M2 348 aaPredicted RBP18.84■□□□□ 0.61
CCDC43-205ENST00000592333 MOSPD1Q9UJG1 213 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 ANAPC7Q9UJX3 599 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 CAPN11Q9UMQ6 739 aa18.84■□□□□ 0.61
CCDC43-205ENST00000592333 B4DGG1 531 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 CASC3O15234 703 aaKnown RBP18.83■□□□□ 0.6
CCDC43-205ENST00000592333 LIPCP11150 499 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 TCF4P15884 667 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 LHCGRP22888 699 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 IL4RP24394 825 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 ETV3P41162 512 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 RPL26P61254 145 aaKnown RBP18.83■□□□□ 0.6
CCDC43-205ENST00000592333 SQSTM1Q13501 440 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 KRT81Q14533 505 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 PAFAH1B3Q15102 231 aaKnown RBP18.83■□□□□ 0.6
CCDC43-205ENST00000592333 CAVIN1Q6NZI2 390 aaKnown RBP18.83■□□□□ 0.6
CCDC43-205ENST00000592333 HSD11B1LQ7Z5J1 315 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 PIM3Q86V86 326 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 SLITRK4Q8IW52 837 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 TSGA13Q96PP4 275 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 NUP85Q9BW27 656 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 FOXP3Q9BZS1 431 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 SEPT10Q9P0V9 454 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 RPL26L1Q9UNX3 145 aaKnown RBP18.83■□□□□ 0.6
CCDC43-205ENST00000592333 LOXL2Q9Y4K0 774 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 KIF26BQ2KJY2 2108 aa18.83■□□□□ 0.6
CCDC43-205ENST00000592333 PMS2P1A4D2B8 440 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 NPIPB15A6NHN6 443 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-205ENST00000592333 HGSO14964 777 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-205ENST00000592333 MATN3O15232 486 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 FGF1P05230 155 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 CA4P22748 312 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 CCNCP24863 283 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 GARSP41250 739 aaKnown RBP18.82■□□□□ 0.6
CCDC43-205ENST00000592333 GALNT2Q10471 571 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 PDK2Q15119 407 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 CCDC122Q5T0U0 273 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 ALKBH5Q6P6C2 394 aaKnown RBP18.82■□□□□ 0.6
CCDC43-205ENST00000592333 ADAMTSL4Q6UY14 1074 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 Q6ZVL8 140 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 NRROSQ86YC3 692 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 MAP7D3Q8IWC1 876 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 PELI3Q8N2H9 469 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 Q8N9G6 341 aaPredicted RBP18.82■□□□□ 0.6
CCDC43-205ENST00000592333 CCL4L1Q8NHW4 92 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 ZDHHC1Q8WTX9 485 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 MAML1Q92585 1016 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 ZNF670Q9BS34 389 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 CDH19Q9H159 772 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 SPATS2LQ9NUQ6 558 aaKnown RBP18.82■□□□□ 0.6
CCDC43-205ENST00000592333 TAAR2Q9P1P5 351 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 SUFUQ9UMX1 484 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 LUC7L2Q9Y383 392 aaKnown RBP18.82■□□□□ 0.6
CCDC43-205ENST00000592333 UNC13CQ8NB66 2214 aa18.82■□□□□ 0.6
CCDC43-205ENST00000592333 TTC24A2A3L6 582 aaPredicted RBP18.81■□□□□ 0.6
CCDC43-205ENST00000592333 RHPN2P1A8MT19 583 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 FUCA1P04066 466 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 ARSEP51690 589 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 UBASH3AP57075 661 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 MAXP61244 160 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 FANCCQ00597 558 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 TRA2AQ13595 282 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCDC43-205ENST00000592333 LRP8Q14114 963 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 TCEA2Q15560 299 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 IFI16Q16666 785 aaKnown RBP18.81■□□□□ 0.6
CCDC43-205ENST00000592333 TMEM164Q5U3C3 297 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 TXNRD3NBQ6F5E7 133 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 RAET1GQ6H3X3 334 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 NRSN1Q8IZ57 195 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 MED8Q96G25 268 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 LYSMD1Q96S90 227 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 SEMA3CQ99985 751 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 UVRAGQ9P2Y5 699 aa18.81■□□□□ 0.6
CCDC43-205ENST00000592333 COL6A6A6NMZ7 2263 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 A0A087X0T9 212 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 A0A0J9YYE9 177 aa18.8■□□□□ 0.6
CCDC43-205ENST00000592333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms