RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 LHCGRP22888 699 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 ADCY8P40145 1251 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 POLE2P56282 527 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 CDK3Q00526 305 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 KCNAB2Q13303 367 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 SQSTM1Q13501 440 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 TRA2AQ13595 282 aaKnown RBP eCLIP16.3■□□□□ 0.2
NPC1-205ENST00000587163 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
NPC1-205ENST00000587163 FKBP15Q5T1M5 1219 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 ERMARDQ5T6L9 678 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 ACAD10Q6JQN1 1059 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 PGBD5Q8N414 524 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 AGBL5Q8NDL9 886 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 OR4D9Q8NGE8 314 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 DTD2Q96FN9 168 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 SNRNP25Q9BV90 132 aaKnown RBP16.3■□□□□ 0.2
NPC1-205ENST00000587163 CDH19Q9H159 772 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 EPN3Q9H201 632 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 SLC39A1Q9NY26 324 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 TAS2R14Q9NYV8 317 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 RELNP78509 3460 aa16.3■□□□□ 0.2
NPC1-205ENST00000587163 A0A0U1RQS6 177 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 THRAP10827 490 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 VIPR1P32241 457 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 MAMLD1Q13495 774 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
NPC1-205ENST00000587163 IGFBP7Q16270 282 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 RFLNAQ6ZTI6 216 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 Q6ZVL8 140 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 CYP4V2Q6ZWL3 525 aaPredicted RBP16.29■□□□□ 0.2
NPC1-205ENST00000587163 CACNA2D3Q8IZS8 1091 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 NEK11Q8NG66 645 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 PDCD6IPQ8WUM4 868 aaKnown RBP16.29■□□□□ 0.2
NPC1-205ENST00000587163 PCMTD1Q96MG8 357 aaPredicted RBP16.29■□□□□ 0.2
NPC1-205ENST00000587163 DDA1Q9BW61 102 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 TRIM7Q9C029 511 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 NUP62CLQ9H1M0 184 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 FANCLQ9NW38 375 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 SEPT3Q9UH03 358 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 SLC17A4Q9Y2C5 497 aa16.29■□□□□ 0.2
NPC1-205ENST00000587163 TRBV23OR9-2A0A075B6M9 112 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 GOLGA6CA6NDK9 693 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 GOLGA6BA6NDN3 693 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 NPIPB15A6NHN6 443 aaPredicted RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 NKX2-8O15522 239 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 ZW10O43264 779 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 ATMINO43313 823 aaPredicted RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 PEX11BO96011 259 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 IVLP07476 585 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 GOLGA6DP0CG33 693 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 CR2P20023 1033 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 TNFAIP3P21580 790 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 PSMA2P25787 234 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 CSTF2P33240 577 aaKnown RBP eCLIP16.28■□□□□ 0.2
NPC1-205ENST00000587163 RENBPP51606 427 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 COPB1P53618 953 aaKnown RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 BIRC2Q13490 618 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 PPP6R3Q5H9R7 873 aaPredicted RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 DOK6Q6PKX4 331 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 TSPAN33Q86UF1 283 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 ZNF761Q86XN6 746 aaPredicted RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 BMPERQ8N8U9 685 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 SCARF2Q96GP6 870 aaPredicted RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 SPRY4Q9C004 299 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 NOD2Q9HC29 1040 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 GOLGA6AQ9NYA3 693 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 KCNK4Q9NYG8 393 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 CWC15Q9P013 229 aaKnown RBP16.28■□□□□ 0.2
NPC1-205ENST00000587163 ANKMY1Q9P2S6 941 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 TMEM98Q9Y2Y6 226 aa16.28■□□□□ 0.2
NPC1-205ENST00000587163 EFCAB7A8K855 629 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 B4E171 279 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 EIF3CLB5ME19 914 aaKnown RBP16.27■□□□□ 0.2
NPC1-205ENST00000587163 RAD1O60671 282 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 SOD1P00441 154 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 CPP00450 1065 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 TPM2P07951 284 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 MIPP30301 263 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 TSPAN7P41732 249 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 ACTR1BP42025 376 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 CCR10P46092 362 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 ACTR1AP61163 376 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 TRAF2Q12933 501 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 DPYSQ14117 519 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 UBAP2LQ14157 1087 aaKnown RBP16.27■□□□□ 0.2
NPC1-205ENST00000587163 TMCO4Q5TGY1 634 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 ANKS6Q68DC2 871 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 RAET1GQ6H3X3 334 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 TMEM71Q6P5X7 295 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 TECPR1Q7Z6L1 1165 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 FAM129CQ86XR2 697 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 NUDCD1Q96RS6 583 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 EIF3CQ99613 913 aaKnown RBP16.27■□□□□ 0.2
NPC1-205ENST00000587163 ASPSCR1Q9BZE9 553 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 KCTD5Q9NXV2 234 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 PDP2Q9P2J9 529 aa16.27■□□□□ 0.2
NPC1-205ENST00000587163 TUBD1Q9UJT1 453 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms