RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 MARK2Q7KZI7 788 aaKnown RBP2.91□□□□□ -1.94
VAPA-208ENST00000584796 MCPH1Q8NEM0 835 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 NEK9Q8TD19 979 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 ATOH1Q92858 354 aaPredicted RBP2.91□□□□□ -1.94
VAPA-208ENST00000584796 CD101Q93033 1021 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 COG3Q96JB2 828 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 TESK2Q96S53 571 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 DDX23Q9BUQ8 820 aaKnown RBP2.91□□□□□ -1.94
VAPA-208ENST00000584796 CXorf56Q9H5V9 222 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 DHDHQ9UQ10 334 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 GAB2Q9UQC2 676 aa2.91□□□□□ -1.94
VAPA-208ENST00000584796 MGAMO43451 1857 aa2.9□□□□□ -1.94
VAPA-208ENST00000584796 CPED1A4D0V7 1026 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 FAM172BPA6NC97 362 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 OR6C68A6NDL8 312 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 FAM157AC9JC47 383 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 H0YIN7 160 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 SYT5O00445 386 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 STRNO43815 780 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 NBPF7P0C2Y1 421 aaPredicted RBP2.9□□□□□ -1.95
VAPA-208ENST00000584796 SSTR2P30874 369 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 MTNR1AP48039 350 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 MVDP53602 400 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 ECT2LQ008S8 904 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 DMP1Q13316 513 aaPredicted RBP2.9□□□□□ -1.95
VAPA-208ENST00000584796 LPIN1Q14693 890 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 LRRC24Q50LG9 513 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 PLEKHO1Q53GL0 409 aaPredicted RBP2.9□□□□□ -1.95
VAPA-208ENST00000584796 CCSAPQ6IQ19 270 aaPredicted RBP2.9□□□□□ -1.95
VAPA-208ENST00000584796 LIN54Q6MZP7 749 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 ZNF530Q6P9A1 599 aaPredicted RBP2.9□□□□□ -1.95
VAPA-208ENST00000584796 GDPD4Q6W3E5 623 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 MOB2Q70IA6 237 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 TICAM2Q86XR7 235 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 GALNT15Q8N3T1 639 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 STT3BQ8TCJ2 826 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 OTUD7AQ8TE49 926 aaPredicted RBP2.9□□□□□ -1.95
VAPA-208ENST00000584796 TRIB2Q92519 343 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 FEM1CQ96JP0 617 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 THAP1Q9NVV9 213 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 RNF186Q9NXI6 227 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 SMARCAL1Q9NZC9 954 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 LRFN1Q9P244 771 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 NARFQ9UHQ1 456 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 CDC23Q9UJX2 597 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 PCDHAC2Q9Y5I4 1007 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 CLDN16Q9Y5I7 305 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 ECM29Q5VYK3 1845 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 NCOR1O75376 2440 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 DOCK3Q8IZD9 2030 aa2.9□□□□□ -1.95
VAPA-208ENST00000584796 A0A1B0GUL6 1792 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 AK9Q5TCS8 1911 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 HMGB1P1B2RPK0 211 aaPredicted RBP2.89□□□□□ -1.95
VAPA-208ENST00000584796 TCERG1O14776 1098 aaKnown RBP2.89□□□□□ -1.95
VAPA-208ENST00000584796 CBX6O95503 412 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 METTL18O95568 372 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 LDLRP01130 860 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 CTPS1P17812 591 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 MAP2K2P36507 400 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 GNALP38405 381 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 PNPLA4P41247 253 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 CENPAP49450 140 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 SLC18A2Q05940 514 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 GALNT1Q10472 559 aaPredicted RBP2.89□□□□□ -1.95
VAPA-208ENST00000584796 THOC5Q13769 683 aaKnown RBP2.89□□□□□ -1.95
VAPA-208ENST00000584796 FCN2Q15485 313 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 PFKFB4Q16877 469 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 TMED8Q6PL24 325 aaPredicted RBP2.89□□□□□ -1.95
VAPA-208ENST00000584796 KLHL17Q6TDP4 642 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 KSR2Q6VAB6 950 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 DNAH12Q6ZR08 3092 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 SRLQ86TD4 932 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 DENND6AQ8IWF6 608 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 KLHDC8BQ8IXV7 354 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 MAB21L3Q8N8X9 362 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 ZNF441Q8N8Z8 693 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 IL17RCQ8NAC3 791 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 C3orf49Q96BT1 292 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 TNIP3Q96KP6 325 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 LRFN5Q96NI6 719 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 OR1F2PQ96R84 312 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 ATP8A2Q9NTI2 1148 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 OR6C3Q9NZP0 311 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 NLKQ9UBE8 527 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 POLKQ9UBT6 870 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 KCND3Q9UK17 655 aa2.89□□□□□ -1.95
VAPA-208ENST00000584796 HNRNPCL2B2RXH8 293 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 P2RY10O00398 339 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 CREB3O43889 395 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 ZG16O60844 167 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 DHRS4L1P0CG22 281 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 PDIA3P30101 505 aaKnown RBP2.88□□□□□ -1.95
VAPA-208ENST00000584796 SERPINF1P36955 418 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 TNNT2P45379 298 aaPredicted RBP2.88□□□□□ -1.95
VAPA-208ENST00000584796 TAF6P49848 677 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 GMPSP49915 693 aaPredicted RBP2.88□□□□□ -1.95
VAPA-208ENST00000584796 NEK3P51956 506 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 ZNF132P52740 706 aa2.88□□□□□ -1.95
VAPA-208ENST00000584796 EIF5P55010 431 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms