RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GPSM1Q86YR5 675 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 COLGALT2Q8IYK4 626 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 PIDD1Q9HB75 910 aa11.3□□□□□ -0.6
TOP3A-217ENST00000584582 STX18Q9P2W9 335 aaKnown RBP11.3□□□□□ -0.6
TOP3A-217ENST00000584582 A0A087X1B8 175 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MZF1P28698 734 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 AGTR2P50052 363 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 KCNK10P57789 538 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 DLG1Q12959 904 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 TIGD2Q4W5G0 525 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 IL27RAQ6UWB1 636 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CDKN2AIPNLQ96HQ2 116 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 THUMPD3Q9BV44 507 aaKnown RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CCDC106Q9BWC9 280 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 DRC3Q9H069 523 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 ZDHHC6Q9H6R6 413 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 RAD54BQ9Y620 910 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 COPG1Q9Y678 874 aaKnown RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 SNNO75324 88 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MTX2O75431 263 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 PCNAP12004 261 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MAGEA6P43360 314 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 RGRP47804 291 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MRPS35P82673 323 aaKnown RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 TMTC4Q5T4D3 741 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 STXBP5Q5T5C0 1151 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 NPAS4Q8IUM7 802 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 FBXW8Q8N3Y1 598 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 TTC30BQ8N4P2 665 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 PCYOX1LQ8NBM8 494 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 NMD3Q96D46 503 aaKnown RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 PRDM16Q9HAZ2 1276 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 SYTL2Q9HCH5 934 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 VPS45Q9NRW7 570 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MOSPD1Q9UJG1 213 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 hCG_2014768A0A024R1R8 64 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 PIP5K1BO14986 540 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MUSKO15146 869 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 FKBP6O75344 327 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 PARNO95453 639 aaKnown RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 NDST3O95803 873 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CYBBP04839 570 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 SLC2A4P14672 509 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 LPOP22079 712 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 AQP4P55087 323 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 IL2P60568 153 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 KIAA0930Q6ICG6 404 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MSANTD2Q6P1R3 559 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 SH2D5Q6ZV89 423 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MAVSQ7Z434 540 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 ZBTB46Q86UZ6 589 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 ELMOD1Q8N336 334 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MIEF2Q96C03 454 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 EBF3Q9H4W6 596 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CSNK1G1Q9HCP0 422 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 S100A14Q9HCY8 104 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CFAP97Q9P2B7 532 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 GALPQ9UBC7 116 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF212Q9UDV6 495 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 CROTQ9UKG9 612 aa11.29□□□□□ -0.6
TOP3A-217ENST00000584582 MYOCOSA0A1B0GUC4 107 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF487B1APH4 448 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 M0QZQ0 153 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 COCHO43405 550 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 H2AFYO75367 372 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 FGF1P05230 155 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 ACADSP16219 412 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 GDF5P43026 501 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 BCL2L1Q07817 233 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 WLSQ5T9L3 541 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 RANBP10Q6VN20 620 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 CILP2Q8IUL8 1156 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF419Q96HQ0 510 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 FUBP3Q96I24 572 aaKnown RBP eCLIP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 PPP1R2P1Q96PQ5 205 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 IL12RB2Q99665 862 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 TLR9Q9NR96 1032 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 VTI1BQ9UEU0 232 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 A0A1W2PRU2 124 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 TMEM114B3SHH9 223 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 SLCO1B7G3V0H7 640 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 MATN2O00339 956 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 RPP40O75818 363 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 RPLP2P05387 115 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 ACTR3P61158 418 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 SEMA3BQ13214 749 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 CPSF6Q16630 551 aaKnown RBP eCLIP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 FAM45BPQ6NSW5 357 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 DNAJB7Q7Z6W7 309 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms