RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 NAT6Q93015 286 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 RNF25Q96BH1 459 aaPredicted RBP9.89□□□□□ -0.83
SKA2-208ENST00000583927 IMP4Q96G21 291 aaKnown RBP9.89□□□□□ -0.83
SKA2-208ENST00000583927 SCARF2Q96GP6 870 aaPredicted RBP9.89□□□□□ -0.83
SKA2-208ENST00000583927 VAT1Q99536 393 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 ADGRE3Q9BY15 652 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 NRSN2Q9GZP1 204 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 SLC25A51Q9H1U9 297 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 TCEAL2Q9H3H9 227 aaPredicted RBP9.89□□□□□ -0.83
SKA2-208ENST00000583927 CCDC86Q9H6F5 360 aaKnown RBP9.89□□□□□ -0.83
SKA2-208ENST00000583927 WDR26Q9H7D7 661 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 PHPT1Q9NRX4 125 aaPredicted RBP9.89□□□□□ -0.83
SKA2-208ENST00000583927 KLQ9UEF7 1012 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 PCDHA3Q9Y5H8 950 aa9.89□□□□□ -0.83
SKA2-208ENST00000583927 PIKFYVEQ9Y2I7 2098 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 hCG_1818297A0A087WSY0 165 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 TRABD2BA6NFA1 517 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 SOWAHDA6NJG2 315 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 HACD1B0YJ81 288 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 OPA1O60313 960 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 CST8O60676 142 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 TCEA3O75764 348 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 SOD1P00441 154 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 CTSEP14091 401 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 ETV3P41162 512 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 VAV2P52735 878 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 EPHB1P54762 984 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 SKOR1P84550 965 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 AP1B1Q10567 949 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 XRCC4Q13426 336 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 NR0B2Q15466 257 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 CDKN3Q16667 212 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 DEFB133Q30KQ1 61 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 LRRC66Q68CR7 880 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 OGFOD3Q6PK18 319 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 NPNTQ6UXI9 565 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 ADAMTSL4Q6UY14 1074 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 RAD9BQ6WBX8 426 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 Q6ZVL8 140 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 BBS12Q6ZW61 710 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 DAAM2Q86T65 1068 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 TSPAN33Q86UF1 283 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 NT5DC3Q86UY8 548 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 HID1Q8IV36 788 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 SLC35F3Q8IY50 421 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 PELI3Q8N2H9 469 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 ARL10Q8N8L6 244 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 IFI44Q8TCB0 444 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 TFB1MQ8WVM0 346 aaKnown RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 TSACCQ96A04 125 aaPredicted RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 TEKT5Q96M29 485 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 TRIB3Q96RU7 358 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 SRPK1Q96SB4 655 aaKnown RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 BAG1Q99933 345 aaPredicted RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 LGR4Q9BXB1 951 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 FRMD8Q9BZ67 464 aaPredicted RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 CDH19Q9H159 772 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 CAAP1Q9H8G2 361 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 FGF22Q9HCT0 170 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 TRNAU1APQ9NX07 287 aaKnown RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 NFKBIL1Q9UBC1 381 aaPredicted RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 CLCA2Q9UQC9 943 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 CHKBQ9Y259 395 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 REXO2Q9Y3B8 237 aaKnown RBP9.88□□□□□ -0.83
SKA2-208ENST00000583927 HYOU1Q9Y4L1 999 aa9.88□□□□□ -0.83
SKA2-208ENST00000583927 PTPRQQ9UMZ3 2332 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 PRSS38A1L453 326 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 CCDC66A2RUB6 948 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 SRRM3A6NNA2 597 aaPredicted RBP9.87□□□□□ -0.83
SKA2-208ENST00000583927 A8MX80 341 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 APOC4-APOC2K7ER74 178 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 HAX1O00165 279 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 TAF4O00268 1085 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 ZNF189O75820 626 aaPredicted RBP9.87□□□□□ -0.83
SKA2-208ENST00000583927 MT-CO3P00414 261 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 EPOP01588 193 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 APOC2P02655 101 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 CEACAM5P06731 702 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 IVLP07476 585 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 PNLIPP16233 465 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 CTPS1P17812 591 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 PTPN3P26045 913 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 CTNNA2P26232 953 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 CD86P42081 329 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 CDK3Q00526 305 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 TARDBPQ13148 414 aaKnown RBP eCLIP9.87□□□□□ -0.83
SKA2-208ENST00000583927 PEX6Q13608 980 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 QPCTQ16769 361 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 HENMT1Q5T8I9 393 aaKnown RBP9.87□□□□□ -0.83
SKA2-208ENST00000583927 HEATR4Q86WZ0 1026 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 LRRC57Q8N9N7 239 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 GPR156Q8NFN8 814 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 KIAA1524Q8TCG1 905 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 GPBAR1Q8TDU6 330 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 OR1E3Q8WZA6 343 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 P3H4Q92791 437 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 AP2M1Q96CW1 435 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 NXPE2Q96DL1 559 aa9.87□□□□□ -0.83
SKA2-208ENST00000583927 PDXPQ96GD0 296 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms