RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CXCL12P48061 93 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZNF140P52738 457 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ARHGEF7Q14155 803 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PUM1Q14671 1186 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PTPRCAPQ14761 206 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CNGA3Q16281 694 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TTC31Q49AM3 519 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SPANXN3Q5MJ09 141 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SPDYCQ5MJ68 293 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LRRC66Q68CR7 880 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FBXO38Q6PIJ6 1188 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 KIAA1324Q6UXG2 1013 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 KBTBD6Q86V97 674 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RASSF3Q86WH2 238 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PGBD3Q8N328 593 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 HHIPQ96QV1 700 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 C19orf43Q9BQ61 176 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 EPB41L4BQ9H329 900 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NLE1Q9NVX2 485 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 DLL3Q9NYJ7 618 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SLC2A6Q9UGQ3 507 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FZD4Q9ULV1 537 aa16.35■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NCOR2Q9Y618 2525 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CCDC78A2IDD5 438 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 STX7O15400 261 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RIPK2O43353 540 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TSPAN6O43657 245 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 APBB3O95704 486 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TPMTP51580 245 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 STC1P52823 247 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ACVR1Q04771 509 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FRG1Q14331 258 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 UAP1Q16222 522 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 UBAP2Q5T6F2 1119 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LIPIQ6XZB0 460 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CYS1Q717R9 158 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CAMKK1Q8N5S9 505 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 OR4K2Q8NGD2 314 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 OR13C4Q8NGS5 318 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 OR13J1Q8NGT2 312 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GSDMBQ8TAX9 411 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZNF669Q96BR6 464 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CDKN2AIPNLQ96HQ2 116 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ARFGAP3Q9NP61 516 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SPATA6Q9NWH7 488 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MOCS1Q9NZB8 636 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 USP36Q9P275 1121 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GGT7Q9UJ14 662 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ITM2BQ9Y287 266 aa16.34■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PSMD11O00231 422 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 LAMTOR5O43504 91 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PLRG1O43660 514 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SPAG6O75602 509 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ACSL3O95573 720 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 IGLV3-19P01714 112 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 C1SP09871 688 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HSD17B3P37058 310 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ARCN1P48444 511 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 LIG3P49916 1009 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CCR3P51677 355 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TMPRSS15P98073 1019 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CRYMQ14894 314 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZNF528Q3MIS6 628 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ANO7Q6IWH7 933 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HSD11B1LQ7Z5J1 315 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TECPR1Q7Z6L1 1165 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RAVER1Q8IY67 606 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 OR14C36Q8NHC7 312 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 UBLCP1Q8WVY7 318 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ANKRD7Q92527 254 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 DNAJC1Q96KC8 554 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBATAQ96M53 351 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FUT8Q9BYC5 575 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 BPIFA1Q9NP55 256 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FBXO4Q9UKT5 387 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PKP3Q9Y446 797 aa16.33■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RGSL1A5PLK6 1076 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 K7ESF4 209 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NEMP1O14524 444 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 MMP20O60882 483 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RPP40O75818 363 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SLC4A1P02730 911 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ABHD2P08910 425 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 BPIP17213 487 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GM2AP17900 193 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SPINT3P49223 89 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ARSDP51689 593 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ADPRHP54922 357 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CREB5Q02930 508 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SLC29A2Q14542 456 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 MYLKQ15746 1914 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 KIAA0930Q6ICG6 404 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CAPN12Q6ZSI9 719 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RFLNAQ6ZTI6 216 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CXorf40AQ8TE69 158 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HDAC10Q969S8 669 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 COQ10AQ96MF6 247 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 WRAP53Q9BUR4 548 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms