RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 MMP2P08253 660 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 PLA2G2AP14555 144 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 GPTP24298 496 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 SHMT1P34896 483 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 GABRB2P47870 512 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 RARSP54136 660 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 MPP1Q00013 466 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 SORDQ00796 357 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 BNC1Q01954 994 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 DDR1Q08345 913 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 COL28A1Q2UY09 1125 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 SGO1Q5FBB7 561 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 EFHC1Q5JVL4 640 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 CLIP4Q8N3C7 705 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 CCDC89Q8N998 374 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 TEX19Q8NA77 164 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 HUS1BQ8NHY5 278 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 WASF1Q92558 559 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 MPP4Q96JB8 637 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 CENPOQ9BU64 300 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 RSPH9Q9H1X1 276 aaPredicted RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 PRKRIP1Q9H875 184 aaPredicted RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 NAP1L2Q9ULW6 460 aaPredicted RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 CDC14AQ9UNH5 594 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 AAR2Q9Y312 384 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 PLA2R1Q13018 1463 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 FAM135AQ9P2D6 1515 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 hDV102S1A0JD36 115 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 EIF3CLB5ME19 914 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 HSPA12AO43301 675 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 SLC28A2O43868 658 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 PAPSS2O95340 614 aaPredicted RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 CD4P01730 458 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 SPARCP09486 303 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 FCGR1AP12314 374 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 CD58P19256 250 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 PDLIM4P50479 330 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 GEMIN4P57678 1058 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 ARMC3Q5W041 872 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 HIST2H2BCQ6DN03 193 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 HIST2H2BDQ6DRA6 164 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 CDC73Q6P1J9 531 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 B3GNT6Q6ZMB0 384 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 CREB3L2Q70SY1 520 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 ZC3HC1Q86WB0 502 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 DIS3L2Q8IYB7 885 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 AGBL3Q8NEM8 1001 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 UCMAQ8WVF2 138 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 GTF3C6Q969F1 213 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 MMTAG2Q9BU76 263 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 TM6SF1Q9BZW5 370 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 RANBP17Q9H2T7 1088 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 BRF2Q9HAW0 419 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 SLC6A13Q9NSD5 602 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 SMC4Q9NTJ3 1288 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 HAO1Q9UJM8 370 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 RCOR1Q9UKL0 485 aa4.49□□□□□ -1.69
NF1-220ENST00000581113 INTS6Q9UL03 887 aaKnown RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 CEP170BQ9Y4F5 1589 aaPredicted RBP4.49□□□□□ -1.69
NF1-220ENST00000581113 A2ML1A8K2U0 1454 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 PZPP20742 1482 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 TCOF1Q13428 1488 aaKnown RBP4.48□□□□□ -1.69
NF1-220ENST00000581113 MYO3AQ8NEV4 1616 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 MAST1Q9Y2H9 1570 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 IGLV5-52A0A0A0MRZ9 124 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 CLEC18AA5D8T8 446 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 TMEM202A6NGA9 273 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 NPIPB15A6NHN6 443 aaPredicted RBP4.48□□□□□ -1.69
NF1-220ENST00000581113 TAF4O00268 1085 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 WNT9BO14905 357 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 TGFB1I1O43294 461 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 SEC14L2O76054 403 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 G6PDP11413 515 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 CALRP27797 417 aaKnown RBP4.48□□□□□ -1.69
NF1-220ENST00000581113 ICAM3P32942 547 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 EIF2S3P41091 472 aaKnown RBP4.48□□□□□ -1.69
NF1-220ENST00000581113 DSCR9P59020 149 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 DHX34Q14147 1143 aaKnown RBP4.48□□□□□ -1.69
NF1-220ENST00000581113 FGFBP1Q14512 234 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 TBCEQ15813 527 aaPredicted RBP4.48□□□□□ -1.69
NF1-220ENST00000581113 ALG11Q2TAA5 492 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 XKR9Q5GH70 373 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 KIAA1161Q6NSJ0 714 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 QSOX2Q6ZRP7 698 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 MTSS1LQ765P7 747 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 MEPCEQ7L2J0 689 aaKnown RBP4.48□□□□□ -1.69
NF1-220ENST00000581113 LINGO2Q7L985 606 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 CPLX4Q7Z7G2 160 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 CLEC18CQ8NCF0 446 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 NUDCD2Q8WVJ2 157 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 SMARCE1Q969G3 411 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 ERP27Q96DN0 273 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 FIZ1Q96SL8 496 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 GPR108Q9NPR9 543 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 SELENONQ9NZV5 590 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 SLC9A2Q9UBY0 812 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 STON1Q9Y6Q2 735 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 CAPN7Q9Y6W3 813 aa4.48□□□□□ -1.69
NF1-220ENST00000581113 LTBP4Q8N2S1 1624 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms