RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 IL10RBQ08334 325 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 NFATC3Q12968 1075 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 ZNF235Q14590 738 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 TCEA2Q15560 299 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 CA9Q16790 459 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 ERMARDQ5T6L9 678 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 PHF19Q5T6S3 580 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 TXNRD3NBQ6F5E7 133 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 OGFOD3Q6PK18 319 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 LIPIQ6XZB0 460 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 PIM3Q86V86 326 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 CAMK1DQ8IU85 385 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 Q8N9G6 341 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-214ENST00000580073 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 FNIP1Q8TF40 1166 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 NSMCE1Q8WV22 266 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 FUBP1Q96AE4 644 aaKnown RBP13.39□□□□□ -0.27
TRAF4-214ENST00000580073 ZNF599Q96NL3 588 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 DESI2Q9BSY9 194 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 LACRTQ9GZZ8 138 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 ZMYND15Q9H091 742 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 CYP4F12Q9HCS2 524 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 HAUS2Q9NVX0 235 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 GPATCH2LQ9NWQ4 482 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 LRIT1Q9P2V4 623 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 ANAPC7Q9UJX3 599 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 DUSP10Q9Y6W6 482 aa13.39□□□□□ -0.27
TRAF4-214ENST00000580073 SETXQ7Z333 2677 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 STMND1H3BQB6 276 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 J3KR12 359 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PSMD11O00231 422 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 DFFAO00273 331 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 NOBOXO60393 691 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PPFIA2O75334 1257 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 LRCH4O75427 683 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 WISP1O95388 367 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CPP00450 1065 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CCNB1P14635 433 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 MIPP30301 263 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 TRIM23P36406 574 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CSRP3P50461 194 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PAPOLAP51003 745 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CCZ1BP86790 482 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CCZ1P86791 482 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 RALGDSQ12967 914 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 TRA2AQ13595 282 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 ACOX1Q15067 660 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 AFMIDQ63HM1 303 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 RFX8Q6ZV50 586 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 SLITRK4Q8IW52 837 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 LRRC8AQ8IWT6 810 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 TSEN2Q8NCE0 465 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 ZNF564Q8TBZ8 553 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 OR1E3Q8WZA6 343 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CELF6Q96J87 481 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PDLIM2Q96JY6 352 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CDH19Q9H159 772 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CARS2Q9HA77 564 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 TRNAU1APQ9NX07 287 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 CTTNBP2NLQ9P2B4 639 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PCSK1NQ9UHG2 260 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 INTUQ9ULD6 942 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 RNF215Q9Y6U7 377 aa13.38□□□□□ -0.27
TRAF4-214ENST00000580073 FLNBO75369 2602 aaKnown RBP13.38□□□□□ -0.27
TRAF4-214ENST00000580073 PRAMEF33A0A0G2JMD5 474 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 TMEM202A6NGA9 273 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-214ENST00000580073 BUB1BO60566 1050 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-214ENST00000580073 PRAMEF10O60809 474 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 MTA2O94776 668 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 PYGLP06737 847 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 HGFP14210 728 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 TEAD1P28347 426 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 VIPR1P32241 457 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 MAN1A1P33908 653 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 SERPINB6P35237 376 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 CYLC1P35663 651 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-214ENST00000580073 ARL4AP40617 200 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 GPR3P46089 330 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 SCNN1BP51168 640 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 MAPK10P53779 464 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 GSDMDP57764 484 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 TCEAL1Q15170 157 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 PPP6R3Q5H9R7 873 aaPredicted RBP13.37□□□□□ -0.27
TRAF4-214ENST00000580073 RALGPS1Q5JS13 557 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 PNCKQ6P2M8 343 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 NDUFAF2Q8N183 169 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 NIPA2Q8N8Q9 360 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 NETO2Q8NC67 525 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 PLA2G15Q8NCC3 412 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 GPBAR1Q8TDU6 330 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 ZDHHC1Q8WTX9 485 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms