RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 EFR3BQ9Y2G0 817 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 PCDHA3Q9Y5H8 950 aa14.83□□□□□ -0.04
SS18-212ENST00000579061 ACACAQ13085 2346 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 CCDC66A2RUB6 948 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 EME2A4GXA9 379 aaPredicted RBP14.82□□□□□ -0.04
SS18-212ENST00000579061 TMEM202A6NGA9 273 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 GOLGA6L6A8MZA4 724 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 HACD1B0YJ81 288 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 ANKRD66B4E2M5 251 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 YY2O15391 372 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 PECAM1P16284 738 aaPredicted RBP14.82□□□□□ -0.04
SS18-212ENST00000579061 CTNNA2P26232 953 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 MARCKSL1P49006 195 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 RPIAP49247 311 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 STC1P52823 247 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 NAP1L1P55209 391 aaKnown RBP14.82□□□□□ -0.04
SS18-212ENST00000579061 NR0B2Q15466 257 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 QPCTQ16769 361 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 KAZNQ674X7 775 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 BBS12Q6ZW61 710 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 RD3Q7Z3Z2 195 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 KIAA1328Q86T90 577 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 CCDC50Q8IVM0 306 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 PELI3Q8N2H9 469 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 LPCAT1Q8NF37 534 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 ZCCHC14Q8WYQ9 949 aaKnown RBP14.82□□□□□ -0.04
SS18-212ENST00000579061 OR1E3Q8WZA6 343 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 TEKT5Q96M29 485 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 AGAP3Q96P47 875 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 VAT1Q99536 393 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 MLPHQ9BV36 600 aaPredicted RBP14.82□□□□□ -0.04
SS18-212ENST00000579061 LGR4Q9BXB1 951 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 GLOD4Q9HC38 313 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 FGF22Q9HCT0 170 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 SEPT10Q9P0V9 454 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 DOLKQ9UPQ8 538 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 DUSP10Q9Y6W6 482 aa14.82□□□□□ -0.04
SS18-212ENST00000579061 ASPMQ8IZT6 3477 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 RGSL1A5PLK6 1076 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 FAM149AA5PLN7 773 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 APOC4-APOC2K7ER74 178 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 APOC2P02655 101 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 PTPN3P26045 913 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 PTPN7P35236 360 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 CDK3Q00526 305 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 INSM1Q01101 510 aaPredicted RBP14.81□□□□□ -0.04
SS18-212ENST00000579061 ADCY2Q08462 1091 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 XRCC4Q13426 336 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 PTPRRQ15256 657 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 RAET1GQ6H3X3 334 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 HEATR4Q86WZ0 1026 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 SLC35F3Q8IY50 421 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 DCBLD1Q8N8Z6 715 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 LRRC57Q8N9N7 239 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 IFI44Q8TCB0 444 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 NAT6Q93015 286 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 PDXPQ96GD0 296 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 TRIB3Q96RU7 358 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 CEP41Q9BYV8 373 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 FRMD8Q9BZ67 464 aaPredicted RBP14.81□□□□□ -0.04
SS18-212ENST00000579061 ABCG8Q9H221 673 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 CCDC86Q9H6F5 360 aaKnown RBP14.81□□□□□ -0.04
SS18-212ENST00000579061 SAE1Q9UBE0 346 aaPredicted RBP14.81□□□□□ -0.04
SS18-212ENST00000579061 ZMIZ1Q9ULJ6 1067 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 CLCA2Q9UQC9 943 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 DMXL2Q8TDJ6 3036 aa14.81□□□□□ -0.04
SS18-212ENST00000579061 PRSS38A1L453 326 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 TRABD2BA6NFA1 517 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 OPA1O60313 960 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 CLDN7O95471 211 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 CELA2BP08218 269 aaPredicted RBP14.8□□□□□ -0.04
SS18-212ENST00000579061 CETN2P41208 172 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 GPR1P46091 355 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 RWDD2BP57060 319 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 CDK18Q07002 472 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 KIF5AQ12840 1032 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 LLGL1Q15334 1064 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 CDKN3Q16667 212 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 CDCP2Q5VXM1 449 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 ADAMTSL4Q6UY14 1074 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 SYCE1Q8N0S2 351 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 SPC24Q8NBT2 197 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 WDR48Q8TAF3 677 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 CCHCR1Q8TD31 782 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 AP2M1Q96CW1 435 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 QKIQ96PU8 341 aaKnown RBP eCLIP14.8□□□□□ -0.043e-6■■■■□ 23
SS18-212ENST00000579061 SMIM14Q96QK8 99 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 SRPK1Q96SB4 655 aaKnown RBP14.8□□□□□ -0.04
SS18-212ENST00000579061 CYP4F12Q9HCS2 524 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 PKD2L2Q9NZM6 624 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 FREM2Q5SZK8 3169 aa14.8□□□□□ -0.04
SS18-212ENST00000579061 ZFC3H1O60293 1989 aaKnown RBP14.8□□□□□ -0.04
SS18-212ENST00000579061 A0A0U1RQS6 177 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 C1orf232A0A0U1RR37 186 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 GRID2IPA4D2P6 1211 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 GOLGA6CA6NDK9 693 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 GOLGA6BA6NDN3 693 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 APC2O95996 2303 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 MT-CO3P00414 261 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 SOD1P00441 154 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms