RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 EIF3EP60228 445 aaKnown RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 OTUD4Q01804 1114 aaKnown RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 CDK18Q07002 472 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 XRCC4Q13426 336 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ALG11Q2TAA5 492 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 PROX2Q3B8N5 592 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ZCCHC8Q6NZY4 707 aaKnown RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 DARS2Q6PI48 645 aaKnown RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 DOK6Q6PKX4 331 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 GKN2Q86XP6 184 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 RNF10Q8N5U6 811 aaKnown RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 SPATA22Q8NHS9 363 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ACTL9Q8TC94 416 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ALG3Q92685 438 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ANP32BQ92688 251 aaKnown RBP15.24■□□□□ 0.03
SMG6-220ENST00000576218 APOLD1Q96LR9 279 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 TEKT5Q96M29 485 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ALS2CR12Q96Q35 445 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 SMIM14Q96QK8 99 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 LRRC61Q9BV99 259 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 FSD1LQ9BXM9 530 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 CAAP1Q9H8G2 361 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 TOR4AQ9NXH8 423 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 FAM153AQ9UHL3 310 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 EFR3BQ9Y2G0 817 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 PPIL1Q9Y3C6 166 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 PCDHGA1Q9Y5H4 931 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 ADGRG1Q9Y653 693 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 LRRK1Q38SD2 2015 aa15.24■□□□□ 0.03
SMG6-220ENST00000576218 COL5A1P20908 1838 aaPredicted RBP15.23■□□□□ 0.03
SMG6-220ENST00000576218 A0A0U1RQJ8 604 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 ANKRD66B4E2M5 251 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 CLDN7O95471 211 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 MT-CYBP00156 380 aaPredicted RBP15.23■□□□□ 0.03
SMG6-220ENST00000576218 PYGLP06737 847 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 PYGMP11217 842 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 PTPN7P35236 360 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 RPIAP49247 311 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 ILKQ13418 452 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 NOMO1Q15155 1222 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 QPCTQ16769 361 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 SEL1L2Q5TEA6 688 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 ITPRIPL1Q6GPH6 555 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 UNQ6494/PRO21346Q6UXR6 183 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 PDXPQ96GD0 296 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 TBATAQ96M53 351 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 FAM118BQ9BPY3 351 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 GPR63Q9BZJ6 419 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 ABCG4Q9H172 646 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 USP29Q9HBJ7 922 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 CYP4F12Q9HCS2 524 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 LZTFL1Q9NQ48 299 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 TRHDEQ9UKU6 1024 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 MSRB2Q9Y3D2 182 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 CAPN6Q9Y6Q1 641 aa15.23■□□□□ 0.03
SMG6-220ENST00000576218 CEP295Q9C0D2 2601 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 CPED1A4D0V7 1026 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 TMEM202A6NGA9 273 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 LMO7DNF2Z398 122 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 KCNN4O15554 427 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 GCATO75600 419 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 ZNF189O75820 626 aaPredicted RBP15.22■□□□□ 0.03
SMG6-220ENST00000576218 PRLP01236 227 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 PIRTP0C851 137 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 JUPP14923 745 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 GM2AP17900 193 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 ACP1P24666 158 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 RBL1P28749 1068 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 STC1P52823 247 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 CDK3Q00526 305 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 PTSQ03393 145 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 WASHC5Q12768 1159 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 PRPSAP1Q14558 356 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 NR0B2Q15466 257 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 SLC14A2Q15849 920 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 CDKN3Q16667 212 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 AADACL2Q6P093 401 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 TAF8Q7Z7C8 310 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 LRRC8AQ8IWT6 810 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 NRSN1Q8IZ57 195 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 ZNF567Q8N184 647 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 TTC13Q8NBP0 860 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 IPMKQ8NFU5 416 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 LRRC45Q96CN5 670 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 SYNDIG1Q9H7V2 258 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 CARS2Q9HA77 564 aaKnown RBP15.22■□□□□ 0.03
SMG6-220ENST00000576218 GRPEL1Q9HAV7 217 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 ZFYVE1Q9HBF4 777 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 FGF22Q9HCT0 170 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 MRPL40Q9NQ50 206 aaKnown RBP15.22■□□□□ 0.03
SMG6-220ENST00000576218 SIRPGQ9P1W8 387 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 GULP1Q9UBP9 304 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 SHOC2Q9UQ13 582 aa15.22■□□□□ 0.03
SMG6-220ENST00000576218 PRSS38A1L453 326 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 TPP1O14773 563 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 TNFRSF10CO14798 259 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 INPP4BO15327 924 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 ASMTLO95671 621 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 NDST3O95803 873 aa15.21■□□□□ 0.03
SMG6-220ENST00000576218 HOXC4P09017 264 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms