RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ARHGAP42A6NI28 874 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 EIF3CLB5ME19 914 aaKnown RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 PSMD11O00231 422 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 POLR1CO15160 346 aaPredicted RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 PPM1DO15297 605 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 INPP4BO15327 924 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 CREB3O43889 395 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 STK17BO94768 372 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 CYP1A1P04798 512 aaPredicted RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 MMEP08473 750 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 KRT7P08729 469 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 GPD1P21695 349 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 AK4P27144 223 aaPredicted RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 OAS2P29728 719 aaKnown RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 ADCY8P40145 1251 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 ACTR1BP42025 376 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 NSFP46459 744 aaKnown RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 FASLGP48023 281 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 ACTR1AP61163 376 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 VWA3BQ502W6 1294 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 TMCO4Q5TGY1 634 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 C16orf46Q6P387 395 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 SCYL2Q6P3W7 929 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 TRIM72Q6ZMU5 477 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 ASB18Q6ZVZ8 466 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 ARHGAP22Q7Z5H3 698 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 HEATR4Q86WZ0 1026 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 CCDC13Q8IYE1 715 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 NAGSQ8N159 534 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 LZTR1Q8N653 840 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 EPS8L1Q8TE68 723 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 COQ10AQ96MF6 247 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 EIF3CQ99613 913 aaKnown RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 EPB41L1Q9H4G0 881 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 LRRC19Q9H756 370 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 SUDS3Q9H7L9 328 aaPredicted RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 PDFQ9HBH1 243 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 CUEDC1Q9NWM3 386 aaPredicted RBP8.98□□□□□ -0.97
SMG6-218ENST00000575454 TP53TG5Q9Y2B4 290 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 KCNMB2Q9Y691 235 aa8.98□□□□□ -0.97
SMG6-218ENST00000575454 TTLL8A6PVC2 850 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 F8VZ95 297 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 J3KR12 359 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 TRAFD1O14545 582 aaPredicted RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 SOCS5O75159 536 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 RFPL1O75677 317 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 RECKO95980 971 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 CALB1P05937 261 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 PYGLP06737 847 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 SLC2A4P14672 509 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 UCHL3P15374 230 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 CSF2RBP32927 897 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 RFC1P35251 1148 aaPredicted RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 STAT5AP42229 794 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 SCNN1BP51168 640 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 ZNF143P52747 638 aaPredicted RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 MLLT10P55197 1068 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 GSCP56915 257 aaPredicted RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 CDK3Q00526 305 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 CDR2Q01850 454 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 DPTQ07507 201 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 RAB6CQ53S08 254 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 RAET1GQ6H3X3 334 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 UNC5BQ8IZJ1 945 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 PYROXD2Q8N2H3 581 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 SFRP1Q8N474 314 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 AVL9Q8NBF6 648 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 TSEN2Q8NCE0 465 aaKnown RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 JOSD2Q8TAC2 188 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 SSC4DQ8WTU2 575 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 DTD2Q96FN9 168 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 SCARF2Q96GP6 870 aaPredicted RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 PSKH2Q96QS6 385 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 OR2M4Q96R27 311 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 CTRCQ99895 268 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 C11orf70Q9BRQ4 267 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 SELENOOQ9BVL4 669 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 NAA15Q9BXJ9 866 aaKnown RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 MAGEB5Q9BZ81 275 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 RAB6CQ9H0N0 254 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 SP110Q9HB58 689 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 ADAM22Q9P0K1 906 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 B4GALT6Q9UBX8 382 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 KCND3Q9UK17 655 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 FZD10Q9ULW2 581 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 POLHQ9Y253 713 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 FHOD1Q9Y613 1164 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 RPS6KL1Q9Y6S9 549 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 NF1P21359 2839 aa8.97□□□□□ -0.97
SMG6-218ENST00000575454 TP53BP1Q12888 1972 aaPredicted RBP8.97□□□□□ -0.97
SMG6-218ENST00000575454 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
SMG6-218ENST00000575454 SPENQ96T58 3664 aaKnown RBP8.96□□□□□ -0.97
SMG6-218ENST00000575454 FAM170AA1A519 330 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 GOLGA6CA6NDK9 693 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 GOLGA6BA6NDN3 693 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 SIGLEC16A6NMB1 481 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 A8MU76 341 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 A8MX80 341 aa8.96□□□□□ -0.98
SMG6-218ENST00000575454 PES1O00541 588 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms