RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	KCNMB4	Q86W47	210 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	GPR150	Q8NGU9	434 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	OR4L1	Q8NH43	312 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	DNAJC1	Q96KC8	554 aa	Known RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBATA	Q96M53	351 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	NECAB3	Q96P71	396 aa	Predicted RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	PLEKHG4B	Q96PX9	1271 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	TRIM56	Q9BRZ2	755 aa	Known RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	FAM167B	Q9BTA0	163 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	ACBD3	Q9H3P7	528 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	SLC24A2	Q9UI40	661 aa		11.89	□□□□□ -0.51
PRPF8-212	ENST00000575116	EXOC1L	A0A1B0GW35	172 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116		A8MX80	341 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	PLK4	O00444	970 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	NEMP1	O14524	444 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	SPINT1	O43278	529 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	PLRG1	O43660	514 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	BUD23	O43709	281 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	IGLV3-19	P01714	112 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	SHBG	P04278	402 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	C1S	P09871	688 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	BPI	P17213	487 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	SPAM1	P38567	509 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	LIG3	P49916	1009 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	ARSD	P51689	593 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	TAS2R38	P59533	333 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	DCDC1	P59894	354 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	XIAP	P98170	497 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	THOC5	Q13769	683 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	AGER	Q15109	404 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	KBTBD12	Q3ZCT8	623 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	LRRC73	Q5JTD7	316 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	TEDDM1	Q5T9Z0	273 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	NEPRO	Q6NW34	567 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	TRMT10B	Q6PF06	316 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	AFTPH	Q6ULP2	937 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF765	Q7L2R6	523 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	CYP2U1	Q7Z449	544 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	TECPR1	Q7Z6L1	1165 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	GALNT7	Q86SF2	657 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	SLC26A11	Q86WA9	606 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	RASSF3	Q86WH2	238 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	LRRC6	Q86X45	466 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	TDRP	Q86YL5	185 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	CNTN4	Q8IWV2	1026 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	FLCN	Q8NFG4	579 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	TSTD1	Q8NFU3	115 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	OR6P1	Q8NGX9	317 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	UHMK1	Q8TAS1	419 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	CXorf40A	Q8TE69	158 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	GANC	Q8TET4	914 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	ERLEC1	Q96DZ1	483 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	COQ10A	Q96MF6	247 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZIM3	Q96PE6	472 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	SGK2	Q9HBY8	427 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	PREB	Q9HCU5	417 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	PPAN	Q9NQ55	473 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF446	Q9NWS9	450 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZFAT	Q9P243	1243 aa		11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116	USP36	Q9P275	1121 aa	Known RBP	11.88	□□□□□ -0.51
PRPF8-212	ENST00000575116		A0A0U1RQS6	177 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	CCDC78	A2IDD5	438 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	CCDC162P	A2VCL2	907 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	RASGRF2	O14827	1237 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	WNT9A	O14904	365 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF217	O75362	1048 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	APBB3	O95704	486 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	GOT2	P00505	430 aa	Known RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	ERVK-10	P10266	1014 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	OGN	P20774	298 aa	Known RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	OXTR	P30559	389 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	PPARG	P37231	505 aa	Predicted RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	MSH2	P43246	934 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	CXCL12	P48061	93 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	TPMT	P51580	245 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	CLCN5	P51795	746 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	TMPRSS15	P98073	1019 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	PTPRCAP	Q14761	206 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	MAP7D1	Q3KQU3	841 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	GPR33	Q49SQ1	333 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	FASTKD1	Q53R41	847 aa	Known RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	HSP90AA5P	Q58FG0	334 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	LYPLAL1	Q5VWZ2	237 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	KIAA1161	Q6NSJ0	714 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	MRNIP	Q6NTE8	343 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	KIAA0408	Q6ZU52	694 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	MARK2	Q7KZI7	788 aa	Known RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	HSD11B1L	Q7Z5J1	315 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	UNC5B	Q8IZJ1	945 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	PGBD3	Q8N328	593 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	RIBC1	Q8N443	379 aa	Predicted RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	GPR26	Q8NDV2	337 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	OR14C36	Q8NHC7	312 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	HMGB4	Q8WW32	186 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	SLC44A1	Q8WWI5	657 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms