RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 APRTP07741 180 aa33.07■■■□□ 2.89
CTDNEP1-209ENST00000574205 THEGLP0DJG4 465 aa33.07■■■□□ 2.89
CTDNEP1-209ENST00000574205 ENGP17813 658 aa33.07■■■□□ 2.89
CTDNEP1-209ENST00000574205 ESRP1Q6NXG1 681 aaKnown RBP33.07■■■□□ 2.89
CTDNEP1-209ENST00000574205 EID2BQ96D98 161 aa33.07■■■□□ 2.89
CTDNEP1-209ENST00000574205 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 TOR1BO14657 336 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 SUN1O94901 812 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 RABIFP47224 123 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 PFN3P60673 137 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 MTM1Q13496 603 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 GLT6D1Q7Z4J2 308 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 PTAR1Q7Z6K3 402 aaPredicted RBP33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 NRSN1Q8IZ57 195 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 OR13H1Q8NG92 308 aa33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 EIF2B3Q9NR50 452 aaKnown RBP33.07■■■□□ 2.88
CTDNEP1-209ENST00000574205 RGSL1A5PLK6 1076 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 AURKAO14965 403 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 PCCBP05166 539 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 HMGCLP35914 325 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 SPINT3P49223 89 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 VPS41P49754 854 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 BNC1Q01954 994 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 DPTQ07507 201 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 GPS1Q13098 491 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 KCTD19Q17RG1 926 aaPredicted RBP33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 KIF19Q2TAC6 998 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 IL27RAQ6UWB1 636 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 Q6ZSR6 202 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 ZNF765Q7L2R6 523 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 KLHL7Q8IXQ5 586 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 CDC23Q9UJX2 597 aa33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 DYNC1LI1Q9Y6G9 523 aaKnown RBP33.06■■■□□ 2.88
CTDNEP1-209ENST00000574205 URI1O94763 535 aaPredicted RBP33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 SLC4A1P02730 911 aa33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 NXPH1P58417 271 aa33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 YPEL5P62699 121 aa33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 INPP5AQ14642 412 aa33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 AASDHQ4L235 1098 aaPredicted RBP33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 RFLNAQ6ZTI6 216 aa33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 ALYREFQ86V81 257 aaKnown RBP33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 DCP2Q8IU60 420 aaKnown RBP33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 GPR27Q9NS67 375 aa33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 CD84Q9UIB8 345 aa33.05■■■□□ 2.88
CTDNEP1-209ENST00000574205 CTSKP43235 329 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 MSLNQ13421 630 aaPredicted RBP33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 PPP1R7Q15435 360 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 NLRP8Q86W28 1048 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 PLA2G15Q8NCC3 412 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 SPATA4Q8NEY3 305 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 AP2M1Q96CW1 435 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 CDH19Q9H159 772 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 ABCG8Q9H221 673 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 SNX11Q9Y5W9 270 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 SCN8AQ9UQD0 1980 aa33.04■■■□□ 2.88
CTDNEP1-209ENST00000574205 TSHRP16473 764 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 ATXN3P54252 364 aaPredicted RBP33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 CDH17Q12864 832 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 PNCKQ6P2M8 343 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 KDM7AQ6ZMT4 941 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 SLC22A18ASQ8N1D0 253 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 TTC30BQ8N4P2 665 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 BRSK1Q8TDC3 778 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 EDEM2Q9BV94 578 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 GDF3Q9NR23 364 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 RAD18Q9NS91 495 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 RXFP3Q9NSD7 469 aa33.03■■■□□ 2.88
CTDNEP1-209ENST00000574205 TRIM23P36406 574 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 CDK16Q00536 496 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 PPP1R21Q6ZMI0 780 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 DNAAF3Q8N9W5 541 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 OR52K1Q8NGK4 314 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 KIF18AQ8NI77 898 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 SCAMP4Q969E2 229 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 GTPBP2Q9BX10 602 aaKnown RBP33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 TMEM131Q92545 1883 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 DR1Q01658 176 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 TAF1AQ15573 450 aaPredicted RBP33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 SYDE1Q6ZW31 735 aaPredicted RBP33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 SPATS2Q86XZ4 545 aaKnown RBP33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 KIAA2013Q8IYS2 634 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 PELI3Q8N2H9 469 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 FAM83DQ9H4H8 585 aa33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 NFKBIL1Q9UBC1 381 aaPredicted RBP33.02■■■□□ 2.88
CTDNEP1-209ENST00000574205 K7ESM1 405 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 CER1O95813 267 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 PYGLP06737 847 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 TPSB2P20231 275 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 PTGIRP43119 386 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 DCDC1P59894 354 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 CKAP4Q07065 602 aaKnown RBP33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 PTK6Q13882 451 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 PDE1CQ14123 709 aaPredicted RBP33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 TPSAB1Q15661 275 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 RAET1GQ6H3X3 334 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 ZNF572Q7Z3I7 529 aaPredicted RBP33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 APOOQ9BUR5 198 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 ERVMER34-1Q9H9K5 563 aa33.01■■■□□ 2.87
CTDNEP1-209ENST00000574205 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP33.01■■■□□ 2.879e-8■■□□□ 13.7
CTDNEP1-209ENST00000574205 IL17CQ9P0M4 197 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms