RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 MRPL40Q9NQ50 206 aaKnown RBP20.27■□□□□ 0.84
CLK3-225ENST00000569063 PHPT1Q9NRX4 125 aaPredicted RBP20.27■□□□□ 0.84
CLK3-225ENST00000569063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.27■□□□□ 0.84
CLK3-225ENST00000569063 CPED1A4D0V7 1026 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 RCCD1A6NED2 376 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 CST8O60676 142 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 ZRANB2O95218 330 aaKnown RBP eCLIP20.26■□□□□ 0.83
CLK3-225ENST00000569063 STC1P52823 247 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 CDK3Q00526 305 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 TFDP3Q5H9I0 405 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 ZNF765Q7L2R6 523 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 ARL10Q8N8L6 244 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 MAPK15Q8TD08 544 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 NAT6Q93015 286 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 NXPE2Q96DL1 559 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 IMP4Q96G21 291 aaKnown RBP20.26■□□□□ 0.83
CLK3-225ENST00000569063 ADGRE3Q9BY15 652 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 PADI4Q9UM07 663 aa20.26■□□□□ 0.83
CLK3-225ENST00000569063 PRSS38A1L453 326 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 BTNL10A8MVZ5 291 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 ANKRD66B4E2M5 251 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 IPO7O95373 1038 aaKnown RBP20.25■□□□□ 0.83
CLK3-225ENST00000569063 CEACAM5P06731 702 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 TGM2P21980 687 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 RTP5Q14D33 572 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 PRKD1Q15139 912 aaPredicted RBP20.25■□□□□ 0.83
CLK3-225ENST00000569063 RAET1GQ6H3X3 334 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 RAD9BQ6WBX8 426 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 RFLNAQ6ZTI6 216 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 DAAM2Q86T65 1068 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 NT5DC3Q86UY8 548 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 NRSN1Q8IZ57 195 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 LPCAT1Q8NF37 534 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 EXD1Q8NHP7 514 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 TADA1Q96BN2 335 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 AGAP3Q96P47 875 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 CEP41Q9BYV8 373 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 FRMD8Q9BZ67 464 aaPredicted RBP20.25■□□□□ 0.83
CLK3-225ENST00000569063 SLC25A51Q9H1U9 297 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 ABCG8Q9H221 673 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 CYP4F12Q9HCS2 524 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 SAE1Q9UBE0 346 aaPredicted RBP20.25■□□□□ 0.83
CLK3-225ENST00000569063 REXO2Q9Y3B8 237 aaKnown RBP20.25■□□□□ 0.83
CLK3-225ENST00000569063 ZZEF1O43149 2961 aa20.25■□□□□ 0.83
CLK3-225ENST00000569063 IGF2RP11717 2491 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 hCG_1818297A0A087WSY0 165 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 SOD1P00441 154 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 ADCY2Q08462 1091 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 TCEA2Q15560 299 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 SLC14A2Q15849 920 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 QPCTQ16769 361 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 TEX44Q53QW1 395 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 PERM1Q5SV97 790 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 KAZNQ674X7 775 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 TFB1MQ8WVM0 346 aaKnown RBP20.24■□□□□ 0.83
CLK3-225ENST00000569063 AP2M1Q96CW1 435 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 RBM41Q96IZ5 413 aaKnown RBP20.24■□□□□ 0.83
CLK3-225ENST00000569063 DEPDC7Q96QD5 511 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 MLPHQ9BV36 600 aaPredicted RBP20.24■□□□□ 0.83
CLK3-225ENST00000569063 TMEM168Q9H0V1 697 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 SEPT10Q9P0V9 454 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 CD84Q9UIB8 345 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 GPR34Q9UPC5 381 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 DUSP10Q9Y6W6 482 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 CACNA1BQ00975 2339 aa20.24■□□□□ 0.83
CLK3-225ENST00000569063 MYLKQ15746 1914 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 GOLGA6CA6NDK9 693 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 GOLGA6BA6NDN3 693 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 CLDN7O95471 211 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 FUCA1P04066 466 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 PYGLP06737 847 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 GOLGA6DP0CG33 693 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 PECAM1P16284 738 aaPredicted RBP20.23■□□□□ 0.83
CLK3-225ENST00000569063 GPR1P46091 355 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 MARCKSL1P49006 195 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 LLGL1Q15334 1064 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 OGFOD3Q6PK18 319 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 ADAMTSL4Q6UY14 1074 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 B4GALNT4Q76KP1 1039 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 TAF8Q7Z7C8 310 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 KYQ8NBH2 561 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 KRT35Q92764 455 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 P3H4Q92791 437 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 SCAMP4Q969E2 229 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 TEKT5Q96M29 485 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 TRIB3Q96RU7 358 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 BAG1Q99933 345 aaPredicted RBP20.23■□□□□ 0.83
CLK3-225ENST00000569063 GOLGA6AQ9NYA3 693 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 SIRPGQ9P1W8 387 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 IMPACTQ9P2X3 320 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 GULP1Q9UBP9 304 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 MOSPD1Q9UJG1 213 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 SLC17A4Q9Y2C5 497 aa20.23■□□□□ 0.83
CLK3-225ENST00000569063 GOLGA4Q13439 2230 aaKnown RBP20.23■□□□□ 0.83
CLK3-225ENST00000569063 C1orf232A0A0U1RR37 186 aa20.22■□□□□ 0.83
CLK3-225ENST00000569063 PTPN3P26045 913 aa20.22■□□□□ 0.83
CLK3-225ENST00000569063 CDC25BP30305 580 aa20.22■□□□□ 0.83
CLK3-225ENST00000569063 CTNNA1P35221 906 aaKnown RBP20.22■□□□□ 0.83
CLK3-225ENST00000569063 PPP2R5EQ16537 467 aa20.22■□□□□ 0.83
CLK3-225ENST00000569063 FAM182AQ5T1J6 154 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms