RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 ABCG4Q9H172 646 aa20.12■□□□□ 0.81
ABCA3-206ENST00000569062 CYP4F12Q9HCS2 524 aa20.12■□□□□ 0.81
ABCA3-206ENST00000569062 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
ABCA3-206ENST00000569062 SEPT10Q9P0V9 454 aa20.12■□□□□ 0.81
ABCA3-206ENST00000569062 SAE1Q9UBE0 346 aaPredicted RBP20.12■□□□□ 0.81
ABCA3-206ENST00000569062 GULP1Q9UBP9 304 aa20.12■□□□□ 0.81
ABCA3-206ENST00000569062 MOSPD1Q9UJG1 213 aa20.12■□□□□ 0.81
ABCA3-206ENST00000569062 PCDHB1Q9Y5F3 818 aa20.12■□□□□ 0.81
ABCA3-206ENST00000569062 A0A0A6YYK5 440 aaPredicted RBP20.11■□□□□ 0.81
ABCA3-206ENST00000569062 CAPN8A6NHC0 703 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 TNFRSF10CO14798 259 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 PPP1R12AO14974 1030 aaPredicted RBP20.11■□□□□ 0.81
ABCA3-206ENST00000569062 CASC3O15234 703 aaKnown RBP20.11■□□□□ 0.81
ABCA3-206ENST00000569062 CA4P22748 312 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 ADCY2Q08462 1091 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 KAZNQ674X7 775 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 RAET1GQ6H3X3 334 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 LVRNQ6Q4G3 990 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 SPOCD1Q6ZMY3 1216 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 SCG3Q8WXD2 468 aaKnown RBP20.11■□□□□ 0.81
ABCA3-206ENST00000569062 NXPE2Q96DL1 559 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 AGAP3Q96P47 875 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 TMEM168Q9H0V1 697 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 ABCG8Q9H221 673 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 PHPT1Q9NRX4 125 aaPredicted RBP20.11■□□□□ 0.81
ABCA3-206ENST00000569062 RAXQ9Y2V3 346 aa20.11■□□□□ 0.81
ABCA3-206ENST00000569062 PRSS38A1L453 326 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 CST8O60676 142 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 CLDN7O95471 211 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 SOD1P00441 154 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 FUCA1P04066 466 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 PECAM1P16284 738 aaPredicted RBP20.1■□□□□ 0.81
ABCA3-206ENST00000569062 ZNF30P17039 623 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 RPIAP49247 311 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 CDK3Q00526 305 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 DPTQ07507 201 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 C11orf63Q6NUN7 778 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 RAD9BQ6WBX8 426 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 TMTC1Q8IUR5 882 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 SDR16C5Q8N3Y7 309 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 ARL10Q8N8L6 244 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 KYQ8NBH2 561 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 CCL4L1Q8NHW4 92 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 PTCD2Q8WV60 388 aaKnown RBP20.1■□□□□ 0.81
ABCA3-206ENST00000569062 SCAMP4Q969E2 229 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 NRSN2Q9GZP1 204 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 LUC7LQ9NQ29 371 aaKnown RBP20.1■□□□□ 0.81
ABCA3-206ENST00000569062 PADI4Q9UM07 663 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 GPR34Q9UPC5 381 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 REXO2Q9Y3B8 237 aaKnown RBP20.1■□□□□ 0.81
ABCA3-206ENST00000569062 AK5Q9Y6K8 562 aa20.1■□□□□ 0.81
ABCA3-206ENST00000569062 ANKRD11Q6UB99 2663 aaPredicted RBP20.1■□□□□ 0.81
ABCA3-206ENST00000569062 DSPP15924 2871 aaKnown RBP20.09■□□□□ 0.81
ABCA3-206ENST00000569062 PDE2AO00408 941 aaPredicted RBP20.09■□□□□ 0.81
ABCA3-206ENST00000569062 CEACAM5P06731 702 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 GPR1P46091 355 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 STC1P52823 247 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 RPL26P61254 145 aaKnown RBP20.09■□□□□ 0.81
ABCA3-206ENST00000569062 RTP5Q14D33 572 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 QPCTQ16769 361 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 TAF8Q7Z7C8 310 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 DAAM2Q86T65 1068 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 SFTPA2Q8IWL1 248 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 KATNAL2Q8IYT4 538 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 KRT35Q92764 455 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 AP2M1Q96CW1 435 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 AGAP2Q99490 1192 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 FRMD8Q9BZ67 464 aaPredicted RBP20.09■□□□□ 0.81
ABCA3-206ENST00000569062 SUDS3Q9H7L9 328 aaPredicted RBP20.09■□□□□ 0.81
ABCA3-206ENST00000569062 RPL26L1Q9UNX3 145 aaKnown RBP20.09■□□□□ 0.81
ABCA3-206ENST00000569062 DUSP10Q9Y6W6 482 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 PKD1L2Q7Z442 2459 aa20.09■□□□□ 0.81
ABCA3-206ENST00000569062 APC2O95996 2303 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 hCG_1818297A0A087WSY0 165 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 ANKRD66B4E2M5 251 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 CSO75390 466 aaKnown RBP20.08■□□□□ 0.81
ABCA3-206ENST00000569062 ZRANB2O95218 330 aaKnown RBP eCLIP20.08■□□□□ 0.81
ABCA3-206ENST00000569062 TEAD1P28347 426 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 POLD2P49005 469 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 NR2C2P49116 596 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 TFDP2Q14188 446 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 GALNT3Q14435 633 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 PRKD1Q15139 912 aaPredicted RBP20.08■□□□□ 0.81
ABCA3-206ENST00000569062 TFDP3Q5H9I0 405 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 KDELC2Q7Z4H8 507 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 NT5DC3Q86UY8 548 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 ACRBPQ8NEB7 543 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 NAT6Q93015 286 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 IMP4Q96G21 291 aaKnown RBP20.08■□□□□ 0.81
ABCA3-206ENST00000569062 DEPDC7Q96QD5 511 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 LYSMD1Q96S90 227 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 CCDC3Q9BQI4 270 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 MLPHQ9BV36 600 aaPredicted RBP20.08■□□□□ 0.81
ABCA3-206ENST00000569062 BRD8Q9H0E9 1235 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 CARS2Q9HA77 564 aaKnown RBP20.08■□□□□ 0.81
ABCA3-206ENST00000569062 RABGEF1Q9UJ41 708 aa20.08■□□□□ 0.81
ABCA3-206ENST00000569062 RALYQ9UKM9 306 aaKnown RBP20.08■□□□□ 0.81
ABCA3-206ENST00000569062 ADAMTS20P59510 1910 aa20.08■□□□□ 0.8
ABCA3-206ENST00000569062 ARHGEF17Q96PE2 2063 aaPredicted RBP20.07■□□□□ 0.8
ABCA3-206ENST00000569062 ACACAQ13085 2346 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms